Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq211 426 3e-117 >seq211 Length=3091 Score = 426 bits (472), Expect = 3e-117 Identities = 280/309 (91%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| || | || | || || ||| |||||||||| Sbjct 313 GAACGAGACCTTAACCTGCTAAATAGCCCGGTCGGCGTCCGCCGGCCGCTGGCTTCTTAG 372 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 373 AGGGACTATCGACTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 432 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct 433 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAGCGAGTCCATCACCTTGGCCG 492 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 493 AGAGGCCCGGGTAATCTTGTTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 552 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||||||||||| || | ||||||||| | | ||||||||||||| Sbjct 553 CTCTTCAACGAGGAATGCCTAGTAGGCACAAGTCATCAGCTTGTGCCGATTACGTCCCTG 612 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 613 CCCTTTGTA 621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947196400640