Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31]
380 sequences; 22,521,034 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq211 426 3e-117
>seq211
Length=3091
Score = 426 bits (472), Expect = 3e-117
Identities = 280/309 (91%), Gaps = 0/309 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| || | || | || || ||| ||||||||||
Sbjct 313 GAACGAGACCTTAACCTGCTAAATAGCCCGGTCGGCGTCCGCCGGCCGCTGGCTTCTTAG 372
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 373 AGGGACTATCGACTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 432
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||
Sbjct 433 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGGGCCAGCGAGTCCATCACCTTGGCCG 492
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 493 AGAGGCCCGGGTAATCTTGTTAAACCCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 552
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||||||||||| || | ||||||||| | | |||||||||||||
Sbjct 553 CTCTTCAACGAGGAATGCCTAGTAGGCACAAGTCATCAGCTTGTGCCGATTACGTCCCTG 612
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 613 CCCTTTGTA 621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947196400640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |