Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31]
380 sequences; 22,521,034 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq234 255 1e-65
>seq234
Length=2218
Score = 255 bits (282), Expect = 1e-65
Identities = 227/280 (81%), Gaps = 17/280 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| |||||||||| |||||||||||||| ||||| |
Sbjct 520 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTCTGCGGCTGTCTGACAAGGCATT 463
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 462 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 403
Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179
||| | || || || || |||| | |||| |||||| |||||| |||||||||||
Sbjct 402 GAAAGCGGCGACACCTGCCCCGCACGTTGTAGCTGGATACAGATAGGCCTCGGCCCCGAA 343
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|| ||| ||||||| || |||| | || |||| |||| ||||||||||
Sbjct 342 CCACAGCGGGCCGGC-ACCGGCGCCTCG-----GCGC--------CAGCCGGCGGATTGC 297
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGACC 279
||| |||||| |||| |||||| ||||| |||||||||||
Sbjct 296 AATGTCACCACGCGCGGGGATAGATCCTCTGCAGACGACC 257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819196984320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |