Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq234 255 1e-65 >seq234 Length=2218 Score = 255 bits (282), Expect = 1e-65 Identities = 227/280 (81%), Gaps = 17/280 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| |||||||||| |||||||||||||| ||||| | Sbjct 520 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTCTGCGGCTGTCTGACAAGGCATT 463 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 462 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 403 Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179 ||| | || || || || |||| | |||| |||||| |||||| ||||||||||| Sbjct 402 GAAAGCGGCGACACCTGCCCCGCACGTTGTAGCTGGATACAGATAGGCCTCGGCCCCGAA 343 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 || ||| ||||||| || |||| | || |||| |||| |||||||||| Sbjct 342 CCACAGCGGGCCGGC-ACCGGCGCCTCG-----GCGC--------CAGCCGGCGGATTGC 297 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGACC 279 ||| |||||| |||| |||||| ||||| ||||||||||| Sbjct 296 AATGTCACCACGCGCGGGGATAGATCCTCTGCAGACGACC 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819196984320