Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31] 380 sequences; 22,521,034 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq226 829 0.0 seq71 159 1e-36 >seq226 Length=2389 Score = 829 bits (918), Expect = 0.0 Identities = 486/504 (96%), Gaps = 0/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 493 GTACTCATTCCAATTACAAGACCCTAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 552 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 553 CCCCGTATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 612 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 613 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 672 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 673 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 732 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||| Sbjct 733 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAGAGAGCCCCGGAGGGCATTGGT 792 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 793 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 852 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 853 AATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 912 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||| Sbjct 913 GCCATTCGCAGTTTCACCGTACAATTTGCTTATACTTAGACATGCATGGCTTAATCTTTG 972 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 973 AGACAAGCATATGACTACTGGCAG 996 >seq71 Length=104042 Score = 159 bits (176), Expect = 1e-36 Identities = 130/156 (83%), Gaps = 5/156 (3%) Strand=Plus/Plus Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGC 355 |||| |||||||||||||||||||| | |||||||||| ||| |||| || ||||||| Sbjct 68607 TTGGGTTTTTATCTAATAAATACACTCTTTCCGAAGTCAAAGTTCTTAGTATATATTAGC 68666 Query 356 TCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTT 415 | || ||||||| || ||| ||||| || ||||||||||||||||||||||||| Sbjct 68667 CCCTGACTTACCAC----ATGTATGCAGTAATGTGCTATCAAATAAACGATAACTGATTT 68722 Query 416 AATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT 451 |||||| ||||||||||||||| || ||| |||||| Sbjct 68723 AATGAGTCATTCGCAGTTTCACCGTCTAG-TTGCTT 68757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510394260480