Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20rubrum_20[genbank_20GCA_5F000812105.1_202014-12-31]
380 sequences; 22,521,034 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq226 829 0.0
seq71 159 1e-36
>seq226
Length=2389
Score = 829 bits (918), Expect = 0.0
Identities = 486/504 (96%), Gaps = 0/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 493 GTACTCATTCCAATTACAAGACCCTAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 552
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 553 CCCCGTATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 612
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 613 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 672
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 673 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 732
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| ||||||||||||||||||| |||||||| ||||| |||||
Sbjct 733 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAGAGAGCCCCGGAGGGCATTGGT 792
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 793 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGAGGTTTTTAGCATGTATTAGCTCTAG 852
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 853 AATTACCACAGGTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 912
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||
Sbjct 913 GCCATTCGCAGTTTCACCGTACAATTTGCTTATACTTAGACATGCATGGCTTAATCTTTG 972
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 973 AGACAAGCATATGACTACTGGCAG 996
>seq71
Length=104042
Score = 159 bits (176), Expect = 1e-36
Identities = 130/156 (83%), Gaps = 5/156 (3%)
Strand=Plus/Plus
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGC 355
|||| |||||||||||||||||||| | |||||||||| ||| |||| || |||||||
Sbjct 68607 TTGGGTTTTTATCTAATAAATACACTCTTTCCGAAGTCAAAGTTCTTAGTATATATTAGC 68666
Query 356 TCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTT 415
| || ||||||| || ||| ||||| || |||||||||||||||||||||||||
Sbjct 68667 CCCTGACTTACCAC----ATGTATGCAGTAATGTGCTATCAAATAAACGATAACTGATTT 68722
Query 416 AATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT 451
|||||| ||||||||||||||| || ||| ||||||
Sbjct 68723 AATGAGTCATTCGCAGTTTCACCGTCTAG-TTGCTT 68757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510394260480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |