Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq79 183 5e-44
seq41 82.4 1e-13
>seq79
Length=280
Score = 183 bits (202), Expect = 5e-44
Identities = 168/208 (81%), Gaps = 6/208 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| |
Sbjct 78 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACGAGGAATT-C 135
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | | |||||||| | ||||| ||||||| | | ||||| | ||
Sbjct 136 CTCGTTTATGGGGGAGAATTGCAAACCCCAATCCCAATCACGAAGGAGTTTCAGCGGGTT 195
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| ||| | ||||| || || || | ||| | | |||||||||||||||||||
Sbjct 196 GCCCGGGCCTCTAGGCCAGGGAGA---ACATGCTGATTCCTTCAGTGTAGCGCGCGTGCG 252
Query 180 GCCCAGAACATCTAAGGGCATCACAGAC 207
|||||| |||||||||||||||||||||
Sbjct 253 GCCCAGGACATCTAAGGGCATCACAGAC 280
>seq41
Length=345
Score = 82.4 bits (90), Expect = 1e-13
Identities = 52/55 (95%), Gaps = 1/55 (2%)
Strand=Plus/Plus
Query 171 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 1 GCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 54
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751998098615
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |