Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq79 183 5e-44 seq41 82.4 1e-13 >seq79 Length=280 Score = 183 bits (202), Expect = 5e-44 Identities = 168/208 (81%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| | Sbjct 78 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACGAGGAATT-C 135 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | | |||||||| | ||||| ||||||| | | ||||| | || Sbjct 136 CTCGTTTATGGGGGAGAATTGCAAACCCCAATCCCAATCACGAAGGAGTTTCAGCGGGTT 195 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||| | ||||| || || || | ||| | | ||||||||||||||||||| Sbjct 196 GCCCGGGCCTCTAGGCCAGGGAGA---ACATGCTGATTCCTTCAGTGTAGCGCGCGTGCG 252 Query 180 GCCCAGAACATCTAAGGGCATCACAGAC 207 |||||| ||||||||||||||||||||| Sbjct 253 GCCCAGGACATCTAAGGGCATCACAGAC 280 >seq41 Length=345 Score = 82.4 bits (90), Expect = 1e-13 Identities = 52/55 (95%), Gaps = 1/55 (2%) Strand=Plus/Plus Query 171 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||||||||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 1 GCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 54 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998098615