Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq188 120 8e-25 >seq188 Length=2013537 Score = 120 bits (132), Expect = 8e-25 Identities = 189/268 (71%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||| ||| || | ||||||||||||||| | | |||||||| |||||| Sbjct 2011734 GCATCTGCACTGCTAATTCAATTTCACTGAGCCAATCATCGAGACAGCTGTTGTATCGTT 2011675 Query 73 ACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 | | ||||| |||| | | | | ||| | | ||||| ||| ||||||||||||||| || Sbjct 2011674 AAGTCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTT 2011615 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT-TCGCGTTAGCTAACCCCA 190 || | || ||||||| || | ||||| | ||||| | || || ||| | Sbjct 2011614 ATAGATAAGGCCGCCATTAATCGGGGTGTTCATCAAAACCTAATTAAATAATTAAGTAAA 2011555 Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 250 || ||| ||| ||| || ||||||| | |||||| | |||| | | || | || || Sbjct 2011554 TCTGTTACCCTACCGACATCGGGCAGACATCACACTCAATACTTAGATTTCTATCTTGGC 2011495 Query 251 AGAGTGCTGTGTTTTTAATAAACAGTCG 278 |||||||| |||||| | |||||||||| Sbjct 2011494 AGAGTGCTTTGTTTTAATTAAACAGTCG 2011467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260796709312