Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq74 89.7 2e-15 >seq74 Length=260272 Score = 89.7 bits (98), Expect = 2e-15 Identities = 134/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || || | ||||||| | |||||| ||| | || |||||| | Sbjct 252450 CAAGTCATCATGGCCAAAATATTGTGGGCTATAGACGTGCCACATTTTTCATTACAAAAG 252391 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | | | | | || |||| ||||| |||| ||| || | | ||||||||||| Sbjct 252390 GATGTTATATTGTGAAAATAAGCTAATCCT-TAAATTTGATC--AATATGGATTGTAGTC 252334 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485 || |||||||||| ||||| ||||| ||||||||||| |||| || | ||||||| Sbjct 252333 TGTAACTCGACTACATGAATAAGGAATTACTAGTAATCGTTAATCATCACGTAACGGTGA 252274 Query 486 ATACGTT 492 || |||| Sbjct 252273 AT-CGTT 252268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503996074560