Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq41 187 4e-45
seq79 84.2 3e-14
>seq41
Length=345
Score = 187 bits (206), Expect = 4e-45
Identities = 202/270 (75%), Gaps = 41/270 (15%)
Strand=Plus/Plus
Query 26 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCAT 85
||||||||||||||| ||||||||||||||||||||||||||||||| |||| || |
Sbjct 1 GCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCAATCT-CGTG 58
Query 86 TGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-----------CAGCCA----------CC 124
|||| ||| || |||||||||||||| | |||| |
Sbjct 59 CGGCTCGAAACCGCCGGTCCCTCTAAGAAGAATTTAATTACGCCGCCAGTGAGTCGCGCG 118
Query 125 AACCATAGTCG--------------ATGG--GGCTATTTAGCAGGTTAAGGTCTCGTTCG 168
||| | |||| | || | |||||||||||| || ||||||||||
Sbjct 119 AACGA--GTCGCGCGCACCGAAATGACGGACGCCTATTTAGCAGGCTAGAGTCTCGTTCG 176
Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 177 TTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCC 236
Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGTC 258
| |||||||||||||||| | ||||||||
Sbjct 237 ACCGAATCAAGAAAGAGCTGTTAATCTGTC 266
>seq79
Length=280
Score = 84.2 bits (92), Expect = 3e-14
Identities = 49/51 (96%), Gaps = 0/51 (0%)
Strand=Plus/Plus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62
||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 230 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGAC 280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796797985341
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |