Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq41 187 4e-45 seq79 84.2 3e-14 >seq41 Length=345 Score = 187 bits (206), Expect = 4e-45 Identities = 202/270 (75%), Gaps = 41/270 (15%) Strand=Plus/Plus Query 26 GCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCAT 85 ||||||||||||||| ||||||||||||||||||||||||||||||| |||| || | Sbjct 1 GCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCAATCT-CGTG 58 Query 86 TGGCTGGAAGCCAATAGTCCCTCTAAGAAGC-----------CAGCCA----------CC 124 |||| ||| || |||||||||||||| | |||| | Sbjct 59 CGGCTCGAAACCGCCGGTCCCTCTAAGAAGAATTTAATTACGCCGCCAGTGAGTCGCGCG 118 Query 125 AACCATAGTCG--------------ATGG--GGCTATTTAGCAGGTTAAGGTCTCGTTCG 168 ||| | |||| | || | |||||||||||| || |||||||||| Sbjct 119 AACGA--GTCGCGCGCACCGAAATGACGGACGCCTATTTAGCAGGCTAGAGTCTCGTTCG 176 Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 177 TTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCC 236 Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | |||||||||||||||| | |||||||| Sbjct 237 ACCGAATCAAGAAAGAGCTGTTAATCTGTC 266 >seq79 Length=280 Score = 84.2 bits (92), Expect = 3e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 ||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 230 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGAC 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796797985341