Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq138 174 3e-41
seq25 89.7 9e-16
>seq138
Length=216
Score = 174 bits (192), Expect = 3e-41
Identities = 121/136 (89%), Gaps = 1/136 (1%)
Strand=Plus/Plus
Query 145 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 1 AGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAG 60
Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264
||||||||||||||||||||||||||||||| | || ||| || |||||||||||
Sbjct 61 TTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-CTAAAAACTCTTTATACTAAAGGATC 119
Query 265 GATAGGCCACACTTTC 280
|||||||| |||||
Sbjct 120 GATAGGCCGTGCTTTC 135
>seq25
Length=393
Score = 89.7 bits (98), Expect = 9e-16
Identities = 68/79 (86%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||||||| | ||||| || | |||| | ||||||||||||||||||||||||||||
Sbjct 315 TACTAAGCAGTATTACTATCGCAACGACTCGCCATCAGTAGGGTAAAACTAACCTGTCTC 374
Query 60 ATGACGGTCTAAACCCAGC 78
| |||||||||||||||||
Sbjct 375 ACGACGGTCTAAACCCAGC 393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854397770016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |