Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq79 174 3e-41 seq41 93.3 8e-17 >seq79 Length=280 Score = 174 bits (192), Expect = 3e-41 Identities = 162/205 (79%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 124 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG 183 ||||||||||||||||||||| ||||||||||||||||||||||||| || || | | Sbjct 280 GTCTGTGATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATG 221 Query 184 TTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAG 243 ||| || ||||| ||| | ||| || | | |||||| ||||| | ||||| | Sbjct 220 TTCT---CCCTGGCCTAGAGGCCCGGGCAACCCGCTGAAACTCCTTCGTGATTGGGATTG 164 Query 244 AGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGC 303 | |||||||| | | | | |||||||||| ||| ||||||||| ||||| ||| ||| Sbjct 163 GGGTTTGCAATTCTCCCCCATAAACGAGGAATTCCTCGTAAGCGCGAGTCATAAGCTCGC 104 Query 304 GTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||||||| Sbjct 103 GTTGATTACGTCCCTGCCCTTTGTA 79 >seq41 Length=345 Score = 93.3 bits (102), Expect = 8e-17 Identities = 77/90 (86%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||| | | ||||| || | ||||| |||||||||||||||| Sbjct 88 CTTCTTAGAGGGACCGGCGGTTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 31 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGC 160 |||||||||||||| ||||||||||||||| Sbjct 30 ATGCCCTTAGATGTCCTGGGCCGCACGCGC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947197527808