Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq17 248 3e-63
seq145 116 1e-23
seq73 77.0 1e-11
>seq17
Length=439
Score = 248 bits (274), Expect = 3e-63
Identities = 160/175 (91%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||||||| |||||||||||| ||| | ||| | | ||||||||||||||||||
Sbjct 175 CTCCCACTTATGCTACACCTCTCATGTCTCCTTACAGTGCCAGACTAGAGTCAAGCTCAA 116
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 115 CAGGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 56
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411
|| |||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 55 ATCGTAGGTAGGGACAGCGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 1
Score = 100 bits (110), Expect = 9e-19
Identities = 70/80 (88%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 47 CTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 106
||||||||||||||||||| ||| |||||||| ||||||||| |||||||||| |||||
Sbjct 439 CTTAGGACACCTGCGTTATTCTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGA 380
Query 107 CAATGTCATCAACCCGGATC 126
|| |||| || | |||||||
Sbjct 379 CAGTGTCCTCGAACCGGATC 360
>seq145
Length=214
Score = 116 bits (128), Expect = 1e-23
Identities = 90/107 (84%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 107 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 166
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| ||| ||||||||| ||||||||||||||| || ||||
Sbjct 167 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTC 213
>seq73
Length=292
Score = 77.0 bits (84), Expect = 1e-11
Identities = 44/45 (98%), Gaps = 0/45 (0%)
Strand=Plus/Plus
Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 45
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635195732128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |