Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq25 78.8 2e-12 >seq25 Length=393 Score = 78.8 bits (86), Expect = 2e-12 Identities = 82/105 (78%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 317 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 260 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAG 105 | |||||||||||||| ||||||||||| ||||||||||||||| Sbjct 259 GGTGCGAAGCTACCATCCGCTGGATTATGCCTGAACGCCTCTAAG 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197928704