Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq84 161 3e-37
seq183 140 1e-30
>seq84
Length=240715
Score = 161 bits (178), Expect = 3e-37
Identities = 131/156 (84%), Gaps = 7/156 (4%)
Strand=Plus/Plus
Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGC 355
|||| |||||||||||||||||||| | ||||||||| || ||||||| || |||||||
Sbjct 55122 TTGGGTTTTTATCTAATAAATACACTCTTTCCGAAGTTGG--TTTTTAGTATATATTAGC 55179
Query 356 TCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTT 415
| || ||||||| || ||| ||||| || |||||||||||||||||||||||||
Sbjct 55180 CCCTGACTTACCAC----ATGTATGCAGTAATGTGCTATCAAATAAACGATAACTGATTT 55235
Query 416 AATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT 451
|||||| ||||||||||||||| || ||| ||||||
Sbjct 55236 AATGAGTCATTCGCAGTTTCACCGTCTAG-TTGCTT 55270
>seq183
Length=200
Score = 140 bits (154), Expect = 1e-30
Identities = 127/159 (80%), Gaps = 1/159 (1%)
Strand=Plus/Plus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAAC 403
||||||||||||||||||||| |||| |||||||| ||| || ||| || |||
Sbjct 43 GCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACTGAGTGAGATCTAAGGAAC 102
Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACAT 463
| ||||||| || |||||||||||| || || | || | | |||| ||||| ||||
Sbjct 103 CACAACTGATATATTGAGCCATTCGCGGTATCGCCTTA-ATACGGCTTGCACTTAAACAT 161
Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 502
|||||||||| |||||||||||||||||| |||||||||
Sbjct 162 GCATGGCTTAGTCTTTGAGACAAGCATATAACTACTGGC 200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510396057856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |