Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq241 188 6e-43
seq144 143 2e-29
>seq241
Length=1026449
Score = 188 bits (208), Expect = 6e-43
Identities = 420/628 (67%), Gaps = 2/628 (0%)
Strand=Plus/Plus
Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372
|||||| |||| || ||| || || ||| || | |||||| |||| | ||| ||||
Sbjct 699719 CCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTCCACAAGGCCAAGAA 699778
Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432
||||| || || || || || | || || || ||||| | ||| |||||||||||
Sbjct 699779 TAGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGAGGTCAAGGAACTCAAA 699838
Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492
||| || || |||||||| ||||||||||| || || | || ||| ||| ||||||
Sbjct 699839 GATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCTGGACGCTTGTTGCCACC 699898
Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552
|||||||| || | || |||||||| ||||| | ||| || |||| ||||| ||
Sbjct 699899 CTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGATTCCGTTGGA 699958
Query 66553 TTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACC 66612
||| ||||| || | ||| |||||| || || ||| ||| || || |||||
Sbjct 699959 GGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGACGTTAAGACC 700018
Query 66613 AATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTC 66672
|| || || || ||||| || || |||||| || ||| | | || || ||
Sbjct 700019 GATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCAGTGTGTCGTAGATACCTTC 700078
Query 66673 AATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGC 66732
|| ||| |||| ||| | |||| |||| ||| | ||| || | || || |
Sbjct 700079 GATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCTGCGGGGTTCC 700138
Query 66733 GGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGT 66792
||| |||||| ||||| | || || || ||||| | | |||||| |||||| ||
Sbjct 700139 GGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGAGATTGTATGT 700198
Query 66793 CTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTA 66852
|| || || |||| || || || || || |||| ||| |||||| | | |
Sbjct 700199 TTCAATTACTTTCTCAACGTCCTCACCGTGGATACCGACGGCAACTCGCATTATCATATG 700258
Query 66853 TTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCT 66911
|| |||||||| | || || || ||| | | | | ||| || | ||| || ||||
Sbjct 700259 CTGTGGCCGTTC-AGCAACCTTGCCGTTGGTTCGTAGCAGGTATGACCTTTCAAGCGTCT 700317
Query 66912 TGATACCAAAGTACGAGTAATTGAAATC 66939
||| || || ||| ||| || || ||
Sbjct 700318 TGAAGCCGAAATACTGGTAGTTAAAGTC 700345
>seq144
Length=62475
Score = 143 bits (158), Expect = 2e-29
Identities = 298/436 (68%), Gaps = 7/436 (2%)
Strand=Plus/Minus
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557
|| ||||| | ||||||||| | || ||||| || || || ||| | ||||| ||| ||
Sbjct 14557 GCCTTTGCTGCCGTCGAGGGTATTTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTG 14498
Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617
||||| ||||| || |||||||| || |||||| ||| || | || || || |||||
Sbjct 14497 AAGAAGCGTGGTCTCATGCCCGGACTCACCTTCTCCAACGAACTCATCTCCCGTGACGAA 14438
Query 61618 GGCATGCATTGTGATTTTGC-TGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC-GT 61675
||| | || ||||||||| || || || ||| | | || | ||||||| |
Sbjct 14437 GGCCTACACACTGATTTTGCCTGCCTT-CTGTTCTCTCACC-TCAACT--ATCGTCCTGA 14382
Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735
| | || ||| | | || | ||| || || || ||||| ||||| || |||
Sbjct 14381 CCCCAGTGC-TGTTGAGGCCATCATCACTGAAGCAGTCACCATCGAGCAGGAGTTCTTGA 14323
Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795
| || || | ||| | || ||||||||||| | || |||| ||||| ||||
Sbjct 14322 CCGATGCCCTCCCCTGTGCCCTTCTCGGCATGAATGCTAAGCTCATGTGCCAGTACATTG 14263
Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855
| || || ||||| | || | || | | | |||| ||| | |||| || || | |
Sbjct 14262 AGTTCGTCGCCGATAGGCTTCTCGTTGCTCTTGGTAACAAGAAGTTCTACAACACCACCA 14203
Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915
|||| || || |||||||||| || || || | ||||||||| || || |||||||| |
Sbjct 14202 ACCCCTTCGACTTCATGGACAATATCTCCCTCGCTGGCAAGACCAACTTCTTCGAGAAGC 14143
Query 61916 GTGTAGGCGACTATCA 61931
|||| || || || ||
Sbjct 14142 GTGTTGGAGATTACCA 14127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397566735361040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |