Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq241 188 6e-43 seq144 143 2e-29 >seq241 Length=1026449 Score = 188 bits (208), Expect = 6e-43 Identities = 420/628 (67%), Gaps = 2/628 (0%) Strand=Plus/Plus Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372 |||||| |||| || ||| || || ||| || | |||||| |||| | ||| |||| Sbjct 699719 CCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTCCACAAGGCCAAGAA 699778 Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432 ||||| || || || || || | || || || ||||| | ||| ||||||||||| Sbjct 699779 TAGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGAGGTCAAGGAACTCAAA 699838 Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492 ||| || || |||||||| ||||||||||| || || | || ||| ||| |||||| Sbjct 699839 GATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCTGGACGCTTGTTGCCACC 699898 Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552 |||||||| || | || |||||||| ||||| | ||| || |||| ||||| || Sbjct 699899 CTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGATTCCGTTGGA 699958 Query 66553 TTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACC 66612 ||| ||||| || | ||| |||||| || || ||| ||| || || ||||| Sbjct 699959 GGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGACGTTAAGACC 700018 Query 66613 AATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTC 66672 || || || || ||||| || || |||||| || ||| | | || || || Sbjct 700019 GATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCAGTGTGTCGTAGATACCTTC 700078 Query 66673 AATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGC 66732 || ||| |||| ||| | |||| |||| ||| | ||| || | || || | Sbjct 700079 GATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCTGCGGGGTTCC 700138 Query 66733 GGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGT 66792 ||| |||||| ||||| | || || || ||||| | | |||||| |||||| || Sbjct 700139 GGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGAGATTGTATGT 700198 Query 66793 CTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTA 66852 || || || |||| || || || || || |||| ||| |||||| | | | Sbjct 700199 TTCAATTACTTTCTCAACGTCCTCACCGTGGATACCGACGGCAACTCGCATTATCATATG 700258 Query 66853 TTGAGGCCGTTCGACCAGCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCT 66911 || |||||||| | || || || ||| | | | | ||| || | ||| || |||| Sbjct 700259 CTGTGGCCGTTC-AGCAACCTTGCCGTTGGTTCGTAGCAGGTATGACCTTTCAAGCGTCT 700317 Query 66912 TGATACCAAAGTACGAGTAATTGAAATC 66939 ||| || || ||| ||| || || || Sbjct 700318 TGAAGCCGAAATACTGGTAGTTAAAGTC 700345 >seq144 Length=62475 Score = 143 bits (158), Expect = 2e-29 Identities = 298/436 (68%), Gaps = 7/436 (2%) Strand=Plus/Minus Query 61498 GCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTG 61557 || ||||| | ||||||||| | || ||||| || || || ||| | ||||| ||| || Sbjct 14557 GCCTTTGCTGCCGTCGAGGGTATTTTCTTCAGCGGCTCCTTCGCCTCCATCTTCTGGCTG 14498 Query 61558 AAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAG 61617 ||||| ||||| || |||||||| || |||||| ||| || | || || || ||||| Sbjct 14497 AAGAAGCGTGGTCTCATGCCCGGACTCACCTTCTCCAACGAACTCATCTCCCGTGACGAA 14438 Query 61618 GGCATGCATTGTGATTTTGC-TGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC-GT 61675 ||| | || ||||||||| || || || ||| | | || | ||||||| | Sbjct 14437 GGCCTACACACTGATTTTGCCTGCCTT-CTGTTCTCTCACC-TCAACT--ATCGTCCTGA 14382 Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 | | || ||| | | || | ||| || || || ||||| ||||| || ||| Sbjct 14381 CCCCAGTGC-TGTTGAGGCCATCATCACTGAAGCAGTCACCATCGAGCAGGAGTTCTTGA 14323 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 | || || | ||| | || ||||||||||| | || |||| ||||| |||| Sbjct 14322 CCGATGCCCTCCCCTGTGCCCTTCTCGGCATGAATGCTAAGCTCATGTGCCAGTACATTG 14263 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAA 61855 | || || ||||| | || | || | | | |||| ||| | |||| || || | | Sbjct 14262 AGTTCGTCGCCGATAGGCTTCTCGTTGCTCTTGGTAACAAGAAGTTCTACAACACCACCA 14203 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 |||| || || |||||||||| || || || | ||||||||| || || |||||||| | Sbjct 14202 ACCCCTTCGACTTCATGGACAATATCTCCCTCGCTGGCAAGACCAACTTCTTCGAGAAGC 14143 Query 61916 GTGTAGGCGACTATCA 61931 |||| || || || || Sbjct 14142 GTGTTGGAGATTACCA 14127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566735361040