Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03]
398 sequences; 124,945,702 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq218 295 1e-77
seq154 295 1e-77
seq282 244 2e-62
>seq218
Length=60243
Score = 295 bits (326), Expect = 1e-77
Identities = 205/229 (90%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 51687 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 51744
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 51745 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 51804
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||||||| ||||||||| | |||||||||||||||||||
Sbjct 51805 ACCCAGACCTTCCGGCCAAGGTGATGAACTCGTTGACTCTGTCAGTGTAGCGCGCGTGCG 51864
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 51865 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 51913
Score = 295 bits (326), Expect = 1e-77
Identities = 205/229 (90%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 59431 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 59488
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 59489 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 59548
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||||||| ||||||||| | |||||||||||||||||||
Sbjct 59549 ACCCAGACCTTCCGGCCAAGGTGATGAACTCGTTGACTCTGTCAGTGTAGCGCGCGTGCG 59608
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 59609 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 59657
>seq154
Length=1041817
Score = 295 bits (326), Expect = 1e-77
Identities = 205/229 (90%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 2184 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 2241
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 2242 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 2301
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| ||||| ||||||||||||| ||||||||| | |||||||||||||||||||
Sbjct 2302 ACCCAGACCTTCCGGCCAAGGTGATGAACTCGTTGACTCTGTCAGTGTAGCGCGCGTGCG 2361
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2362 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 2410
>seq282
Length=12744
Score = 244 bits (270), Expect = 2e-62
Identities = 204/239 (85%), Gaps = 13/239 (5%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 8118 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 8061
Query 61 CTCGTT-GA-AGAC-CAAC---AATTGCAAT---GATCTATCCCCATCACGATGAAATTT 111
|||||| || ||| |||| |||||| | | |||||||||| ||||| | |||
Sbjct 8060 CTCGTTCGACAGAGTCAACCTGAATTGCTAGATCGCTCTATCCCCAGCACGACAGAGTTT 8001
Query 112 CA-AAGATTACCCGGACCTGTCGGCCAA-GGTGATAGACTCGTTGAATACATCAGTGTAG 169
| |||||||||| ||||| ||||||| |||||| ||||||||| | |||||||||
Sbjct 8000 AACAAGATTACCCAGACCTTCCGGCCAATGGTGATGAACTCGTTGACTCTGTCAGTGTAG 7941
Query 170 CGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7940 CGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 7882
Score = 152 bits (168), Expect = 8e-35
Identities = 114/130 (88%), Gaps = 3/130 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |
Sbjct 270 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 213
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 212 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 153
Query 120 ACCCGGACCT 129
|||| |||||
Sbjct 152 ACCCAGACCT 143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751997100570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |