Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03]
398 sequences; 124,945,702 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq218 504 1e-140
seq154 504 1e-140
seq282 491 8e-137
>seq218
Length=60243
Score = 504 bits (558), Expect = 1e-140
Identities = 300/314 (96%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||
Sbjct 52647 TGGTCCGGCCGGATCTTTCCTTCTGGCTAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 52588
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 52587 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATGCTCGAATACAT 52528
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 52527 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 52468
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 52467 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 52408
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 52407 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 52348
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 52347 ACGAAAGTTAGGGG 52334
Score = 212 bits (234), Expect = 1e-52
Identities = 147/166 (89%), Gaps = 13/166 (8%)
Strand=Plus/Minus
Query 166 TGGTTTCTAGGACCGCCGTAAT---------GATT--AATAG--GGATAGTCGGGGGTGT 212
||||||||||||||||||||| |||| ||||| ||||||||||||| |
Sbjct 60243 TGGTTTCTAGGACCGCCGTAACTTTAATTGCGATTGTAATAGAGGGATAGTCGGGGGCAT 60184
Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60183 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 60124
Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 60123 CATTTGCCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 60078
>seq154
Length=1041817
Score = 504 bits (558), Expect = 1e-140
Identities = 300/314 (96%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||
Sbjct 3144 TGGTCCGGCCGGATCTTTCCTTCTGGCTAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 3085
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 3084 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATGCTCGAATACAT 3025
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3024 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 2965
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2964 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 2905
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 2904 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 2845
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 2844 ACGAAAGTTAGGGG 2831
>seq282
Length=12744
Score = 491 bits (544), Expect = 8e-137
Identities = 300/316 (95%), Gaps = 2/316 (1%)
Strand=Plus/Plus
Query 5 TGGTCC-GGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCAC-TGGGTGTGCCGGG 62
|||||| |||||| |||||||||||| | ||||||||||||||| |||||||| ||||
Sbjct 7146 TGGTCCCGGCCGGATCTTTCCTTCTGGCTAGCCGCATGCCCTTCACCTGGGTGTGTCGGG 7205
Query 63 GAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAC 122
|| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 7206 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATGCTCGAATAC 7265
Query 123 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7266 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 7325
Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 7326 GTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTT 7385
Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 7386 GGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGT 7445
Query 303 GAACGAAAGTTAGGGG 318
||||||||||||||||
Sbjct 7446 GAACGAAAGTTAGGGG 7461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915196357504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |