Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq218 504 1e-140 seq154 504 1e-140 seq282 491 8e-137 >seq218 Length=60243 Score = 504 bits (558), Expect = 1e-140 Identities = 300/314 (96%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||| Sbjct 52647 TGGTCCGGCCGGATCTTTCCTTCTGGCTAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 52588 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 52587 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATGCTCGAATACAT 52528 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 52527 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 52468 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 52467 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 52408 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 52407 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 52348 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 52347 ACGAAAGTTAGGGG 52334 Score = 212 bits (234), Expect = 1e-52 Identities = 147/166 (89%), Gaps = 13/166 (8%) Strand=Plus/Minus Query 166 TGGTTTCTAGGACCGCCGTAAT---------GATT--AATAG--GGATAGTCGGGGGTGT 212 ||||||||||||||||||||| |||| ||||| ||||||||||||| | Sbjct 60243 TGGTTTCTAGGACCGCCGTAACTTTAATTGCGATTGTAATAGAGGGATAGTCGGGGGCAT 60184 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 60183 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 60124 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | || |||||||||||||||||||||||||||||||||||||||| Sbjct 60123 CATTTGCCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 60078 >seq154 Length=1041817 Score = 504 bits (558), Expect = 1e-140 Identities = 300/314 (96%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||| Sbjct 3144 TGGTCCGGCCGGATCTTTCCTTCTGGCTAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 3085 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 3084 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATGCTCGAATACAT 3025 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3024 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 2965 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2964 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 2905 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 2904 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 2845 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 2844 ACGAAAGTTAGGGG 2831 >seq282 Length=12744 Score = 491 bits (544), Expect = 8e-137 Identities = 300/316 (95%), Gaps = 2/316 (1%) Strand=Plus/Plus Query 5 TGGTCC-GGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCAC-TGGGTGTGCCGGG 62 |||||| |||||| |||||||||||| | ||||||||||||||| |||||||| |||| Sbjct 7146 TGGTCCCGGCCGGATCTTTCCTTCTGGCTAGCCGCATGCCCTTCACCTGGGTGTGTCGGG 7205 Query 63 GAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAC 122 || ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 7206 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATGCTCGAATAC 7265 Query 123 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7266 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 7325 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 7326 GTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTT 7385 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 7386 GGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGT 7445 Query 303 GAACGAAAGTTAGGGG 318 |||||||||||||||| Sbjct 7446 GAACGAAAGTTAGGGG 7461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915196357504