Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq282 358 1e-96 seq218 358 1e-96 seq154 358 1e-96 >seq282 Length=12744 Score = 358 bits (396), Expect = 1e-96 Identities = 237/259 (92%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7963 ACTCGTTGACTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 7904 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 7903 CCTGTTATTGCCTCAAACTTCCATTGGCTTGA-GCCAATAGTCCCTCTAAGAAGCCAGCG 7845 Query 122 ACCAACCATAGTC--GATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | ||| | | |||||||||||||||||||||||||||||||||||| |||| Sbjct 7844 GCCCGCGA-AGTGCGGGTCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 7786 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 7785 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATGATCAAG 7726 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 7725 AAAGAGCTCTCAATCTGTC 7707 >seq218 Length=60243 Score = 358 bits (396), Expect = 1e-96 Identities = 237/259 (92%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 51832 ACTCGTTGACTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 51891 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 51892 CCTGTTATTGCCTCAAACTTCCATTGGCTTGA-GCCAATAGTCCCTCTAAGAAGCCAGCG 51950 Query 122 ACCAACCATAGTC--GATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | ||| | | |||||||||||||||||||||||||||||||||||| |||| Sbjct 51951 GCCCGCGA-AGTGCGGGTCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 52009 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 52010 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATGATCAAG 52069 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 52070 AAAGAGCTCTCAATCTGTC 52088 Score = 358 bits (396), Expect = 1e-96 Identities = 237/259 (92%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59576 ACTCGTTGACTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 59635 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 59636 CCTGTTATTGCCTCAAACTTCCATTGGCTTGA-GCCAATAGTCCCTCTAAGAAGCCAGCG 59694 Query 122 ACCAACCATAGTC--GATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | ||| | | |||||||||||||||||||||||||||||||||||| |||| Sbjct 59695 GCCCGCGA-AGTGCGGGTCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 59753 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 59754 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATGATCAAG 59813 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 59814 AAAGAGCTCTCAATCTGTC 59832 >seq154 Length=1041817 Score = 358 bits (396), Expect = 1e-96 Identities = 237/259 (92%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2329 ACTCGTTGACTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2388 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 2389 CCTGTTATTGCCTCAAACTTCCATTGGCTTGA-GCCAATAGTCCCTCTAAGAAGCCAGCG 2447 Query 122 ACCAACCATAGTC--GATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || | | ||| | | |||||||||||||||||||||||||||||||||||| |||| Sbjct 2448 GCCCGCGA-AGTGCGGGTCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 2506 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 2507 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATGATCAAG 2566 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 2567 AAAGAGCTCTCAATCTGTC 2585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796796927838