Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq218 181 1e-43 seq154 181 1e-43 seq282 179 4e-43 >seq218 Length=60243 Score = 181 bits (200), Expect = 1e-43 Identities = 159/193 (82%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 52477 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 52536 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 52537 AGCATATGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 52596 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182 || ||| |||| ||||| | |||| ||| ||| || | || |||| | ||| Sbjct 52597 CACCCAGTGAAGGGCATGC-GGCTAGCCAGAAGGAAAGATCCGGCCGGACCAGTGCACGC 52655 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 52656 GGTGAGGCGGACC 52668 >seq154 Length=1041817 Score = 181 bits (200), Expect = 1e-43 Identities = 159/193 (82%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2974 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 3033 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 3034 AGCATATGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 3093 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182 || ||| |||| ||||| | |||| ||| ||| || | || |||| | ||| Sbjct 3094 CACCCAGTGAAGGGCATGC-GGCTAGCCAGAAGGAAAGATCCGGCCGGACCAGTGCACGC 3152 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 3153 GGTGAGGCGGACC 3165 >seq282 Length=12744 Score = 179 bits (198), Expect = 4e-43 Identities = 161/198 (81%), Gaps = 12/198 (6%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 7318 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 7259 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 7258 AGCATATGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 7199 Query 126 CACCAA--TGAA-GGCATACGGGCTCACCA-----AGAGGTAGGGCTGGGTAATGCAGTA 177 |||| | |||| ||||| | |||| ||| | || | ||| ||| |||| Sbjct 7198 CACCCAGGTGAAGGGCATGC-GGCTAGCCAGAAGGAAAGATCCGGCCGGG---ACCAGTG 7143 Query 178 CTCGCCGTGAGGCGGACC 195 | ||| |||||||||||| Sbjct 7142 CACGCGGTGAGGCGGACC 7125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595197705132