Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03]
398 sequences; 124,945,702 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq282 233 3e-59
seq218 233 3e-59
>seq282
Length=12744
Score = 233 bits (258), Expect = 3e-59
Identities = 227/285 (80%), Gaps = 9/285 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| ||||||||||||||||||||| || |||| |
Sbjct 11824 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGAAAGGGCATT 11881
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11882 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTG 11941
Query 121 GAACGGGGTGATTC--TCTCCTGCACATCGTAGTCGGATACGAATAGGC--TTCGGCCCC 176
||| | | |||||| | || |||||| ||||| |||||||||||| | | || ||
Sbjct 11942 GAAAGCGATGATTCCTACCCCAGCACATTGTAGTTGGATACGAATAGACCACTTGGTCCT 12001
Query 177 GAACCTTAGCAGGCCGGCAA-CGGGCGTCCCGCGGAAGCGC--GGGGCGCTCAGCTGGCG 233
||| | || ||| ||||| ||| || ||||||| || | | | | || | |
Sbjct 12002 GAATCGCAGAAGGGTGGCAATGGGGTATCTGGCGGAAGAGCCTGTGTGCCCCTGCCGCTG 12061
Query 234 GATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||||| | |||||| |||||||||||||||||||||||
Sbjct 12062 TATAGCAATTTGAGAATGCGCTGGGATAAATCCTTTGCAGACGAC 12106
Score = 205 bits (226), Expect = 2e-50
Identities = 226/290 (78%), Gaps = 16/290 (6%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGC-TGTC-TGACCA---- 54
||||||||||||||| || |||||| ||||||||||||||||| |||| |||
Sbjct 4012 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCGTGTCCTGAAAGTTTT 4069
Query 55 GGCAGT-GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4070 GGCACTTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 4129
Query 114 CATGCCAGAACGGGGTGATTC--TCTCCTGCACATCGTAGTCGGATACGAATAGGC--TT 169
||||| ||| | | |||||| | || |||||| ||||| |||||||||||| | |
Sbjct 4130 CATGCTGGAAAGCGATGATTCCTACCCCAGCACATTGTAGTTGGATACGAATAGACCACT 4189
Query 170 CGGCCCCGAACCTTAGCAGGCCGGCAA-CGGGCGTCCCGCGGAAGCGC--GGGGCGCTCA 226
|| || ||| | || ||| ||||| ||| || ||||||| || | | | |
Sbjct 4190 TGGTCCTGAATCGCAGAAGGGTGGCAATGGGGTATCTGGCGGAAGAGCCTGTGTGCCCCT 4249
Query 227 GCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACG 276
|| | | || ||||||| | |||||| |||||||||||||||||||||
Sbjct 4250 GCCGCTGTATAGCAATTTGAGAATGCGCTGGGATAAATCCTTTGCAGACG 4299
>seq218
Length=60243
Score = 233 bits (258), Expect = 3e-59
Identities = 227/285 (80%), Gaps = 9/285 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| ||||||||||||||||||||| || |||| |
Sbjct 47987 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGAAAGGGCATT 47930
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 47929 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTG 47870
Query 121 GAACGGGGTGATTC--TCTCCTGCACATCGTAGTCGGATACGAATAGGC--TTCGGCCCC 176
||| | | |||||| | || |||||| ||||| |||||||||||| | | || ||
Sbjct 47869 GAAAGCGATGATTCCTACCCCAGCACATTGTAGTTGGATACGAATAGACCACTTGGTCCT 47810
Query 177 GAACCTTAGCAGGCCGGCAA-CGGGCGTCCCGCGGAAGCGC--GGGGCGCTCAGCTGGCG 233
||| | || ||| ||||| ||| || ||||||| || | | | | || | |
Sbjct 47809 GAATCGCAGAAGGGTGGCAATGGGGTATCTGGCGGAAGAGCCTGTGTGCCCCTGCCGCTG 47750
Query 234 GATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||||| | |||||| |||||||||||||||||||||||
Sbjct 47749 TATAGCAATTTGAGAATGCGCTGGGATAAATCCTTTGCAGACGAC 47705
Score = 233 bits (258), Expect = 3e-59
Identities = 227/285 (80%), Gaps = 9/285 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| ||||||||||||||||||||| || |||| |
Sbjct 55725 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGAAAGGGCATT 55668
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 55667 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTG 55608
Query 121 GAACGGGGTGATTC--TCTCCTGCACATCGTAGTCGGATACGAATAGGC--TTCGGCCCC 176
||| | | |||||| | || |||||| ||||| |||||||||||| | | || ||
Sbjct 55607 GAAAGCGATGATTCCTACCCCAGCACATTGTAGTTGGATACGAATAGACCACTTGGTCCT 55548
Query 177 GAACCTTAGCAGGCCGGCAA-CGGGCGTCCCGCGGAAGCGC--GGGGCGCTCAGCTGGCG 233
||| | || ||| ||||| ||| || ||||||| || | | | | || | |
Sbjct 55547 GAATCGCAGAAGGGTGGCAATGGGGTATCTGGCGGAAGAGCCTGTGTGCCCCTGCCGCTG 55488
Query 234 GATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||||| | |||||| |||||||||||||||||||||||
Sbjct 55487 TATAGCAATTTGAGAATGCGCTGGGATAAATCCTTTGCAGACGAC 55443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819196841472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |