Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq282 233 3e-59 seq218 233 3e-59 >seq282 Length=12744 Score = 233 bits (258), Expect = 3e-59 Identities = 227/285 (80%), Gaps = 9/285 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||| || |||| | Sbjct 11824 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGAAAGGGCATT 11881 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11882 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTG 11941 Query 121 GAACGGGGTGATTC--TCTCCTGCACATCGTAGTCGGATACGAATAGGC--TTCGGCCCC 176 ||| | | |||||| | || |||||| ||||| |||||||||||| | | || || Sbjct 11942 GAAAGCGATGATTCCTACCCCAGCACATTGTAGTTGGATACGAATAGACCACTTGGTCCT 12001 Query 177 GAACCTTAGCAGGCCGGCAA-CGGGCGTCCCGCGGAAGCGC--GGGGCGCTCAGCTGGCG 233 ||| | || ||| ||||| ||| || ||||||| || | | | | || | | Sbjct 12002 GAATCGCAGAAGGGTGGCAATGGGGTATCTGGCGGAAGAGCCTGTGTGCCCCTGCCGCTG 12061 Query 234 GATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || ||||||| | |||||| ||||||||||||||||||||||| Sbjct 12062 TATAGCAATTTGAGAATGCGCTGGGATAAATCCTTTGCAGACGAC 12106 Score = 205 bits (226), Expect = 2e-50 Identities = 226/290 (78%), Gaps = 16/290 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGC-TGTC-TGACCA---- 54 ||||||||||||||| || |||||| ||||||||||||||||| |||| ||| Sbjct 4012 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCGTGTCCTGAAAGTTTT 4069 Query 55 GGCAGT-GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4070 GGCACTTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 4129 Query 114 CATGCCAGAACGGGGTGATTC--TCTCCTGCACATCGTAGTCGGATACGAATAGGC--TT 169 ||||| ||| | | |||||| | || |||||| ||||| |||||||||||| | | Sbjct 4130 CATGCTGGAAAGCGATGATTCCTACCCCAGCACATTGTAGTTGGATACGAATAGACCACT 4189 Query 170 CGGCCCCGAACCTTAGCAGGCCGGCAA-CGGGCGTCCCGCGGAAGCGC--GGGGCGCTCA 226 || || ||| | || ||| ||||| ||| || ||||||| || | | | | Sbjct 4190 TGGTCCTGAATCGCAGAAGGGTGGCAATGGGGTATCTGGCGGAAGAGCCTGTGTGCCCCT 4249 Query 227 GCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACG 276 || | | || ||||||| | |||||| ||||||||||||||||||||| Sbjct 4250 GCCGCTGTATAGCAATTTGAGAATGCGCTGGGATAAATCCTTTGCAGACG 4299 >seq218 Length=60243 Score = 233 bits (258), Expect = 3e-59 Identities = 227/285 (80%), Gaps = 9/285 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||| || |||| | Sbjct 47987 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGAAAGGGCATT 47930 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 47929 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTG 47870 Query 121 GAACGGGGTGATTC--TCTCCTGCACATCGTAGTCGGATACGAATAGGC--TTCGGCCCC 176 ||| | | |||||| | || |||||| ||||| |||||||||||| | | || || Sbjct 47869 GAAAGCGATGATTCCTACCCCAGCACATTGTAGTTGGATACGAATAGACCACTTGGTCCT 47810 Query 177 GAACCTTAGCAGGCCGGCAA-CGGGCGTCCCGCGGAAGCGC--GGGGCGCTCAGCTGGCG 233 ||| | || ||| ||||| ||| || ||||||| || | | | | || | | Sbjct 47809 GAATCGCAGAAGGGTGGCAATGGGGTATCTGGCGGAAGAGCCTGTGTGCCCCTGCCGCTG 47750 Query 234 GATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || ||||||| | |||||| ||||||||||||||||||||||| Sbjct 47749 TATAGCAATTTGAGAATGCGCTGGGATAAATCCTTTGCAGACGAC 47705 Score = 233 bits (258), Expect = 3e-59 Identities = 227/285 (80%), Gaps = 9/285 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||| || |||| | Sbjct 55725 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGAAAGGGCATT 55668 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 55667 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTG 55608 Query 121 GAACGGGGTGATTC--TCTCCTGCACATCGTAGTCGGATACGAATAGGC--TTCGGCCCC 176 ||| | | |||||| | || |||||| ||||| |||||||||||| | | || || Sbjct 55607 GAAAGCGATGATTCCTACCCCAGCACATTGTAGTTGGATACGAATAGACCACTTGGTCCT 55548 Query 177 GAACCTTAGCAGGCCGGCAA-CGGGCGTCCCGCGGAAGCGC--GGGGCGCTCAGCTGGCG 233 ||| | || ||| ||||| ||| || ||||||| || | | | | || | | Sbjct 55547 GAATCGCAGAAGGGTGGCAATGGGGTATCTGGCGGAAGAGCCTGTGTGCCCCTGCCGCTG 55488 Query 234 GATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || ||||||| | |||||| ||||||||||||||||||||||| Sbjct 55487 TATAGCAATTTGAGAATGCGCTGGGATAAATCCTTTGCAGACGAC 55443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819196841472