Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014- 04-02] 7 sequences; 34,812,353 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 2e-18 >seq3 Length=5817774 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 3990641 TCCGAAGGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 3990697 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 3990698 GGCAGGGACGTAAT-CAACGCGAGCT 3990722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799980260