Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20muehlenbergii_20[genbank_20GCA_5F000611775.1_202014-
04-02] 7 sequences; 34,812,353 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq3 513 3e-143
>seq3
Length=5817774
Score = 513 bits (568), Expect = 3e-143
Identities = 299/309 (97%), Gaps = 0/309 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3990999 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTCAGGCGGGTCGCCGGCTTCTTAG 3990940
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3990939 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 3990880
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||| |||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 3990879 GATGCTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTACACTCCCTTGGCCG 3990820
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3990819 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 3990760
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 3990759 CTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCTG 3990700
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 3990699 CCCTTTGTA 3990691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199933696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |