Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F000938525.1_202015-03-03] 3,891 sequences; 39,229,750 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq387 75.2 4e-11 >seq387 Length=6249 Score = 75.2 bits (82), Expect = 4e-11 Identities = 112/158 (71%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 325 AAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGA 384 |||| || |||| ||| || | ||||||||| | ||| | | |||||||| | | Sbjct 5865 AAAC-AGTATCTGCACTGTTATTCCAATTTCACTGAGCCAATCATCGAGACAGCTGTTGT 5923 Query 385 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 444 ||||||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||| Sbjct 5924 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 5983 Query 445 TGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAAT 482 | |||| || |||||||||| |||| ||| || Sbjct 5984 CCCTCATAGATAAGGCCGCCGTTTATCGGGGTTTCCAT 6021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702333759616