Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F000938525.1_202015-03-03]
3,891 sequences; 39,229,750 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq387 75.2 4e-11
>seq387
Length=6249
Score = 75.2 bits (82), Expect = 4e-11
Identities = 112/158 (71%), Gaps = 1/158 (1%)
Strand=Plus/Plus
Query 325 AAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGA 384
|||| || |||| ||| || | ||||||||| | ||| | | |||||||| | |
Sbjct 5865 AAAC-AGTATCTGCACTGTTATTCCAATTTCACTGAGCCAATCATCGAGACAGCTGTTGT 5923
Query 385 GTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 444
||||||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||
Sbjct 5924 ATCGTTACATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 5983
Query 445 TGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAAT 482
| |||| || |||||||||| |||| ||| ||
Sbjct 5984 CCCTCATAGATAAGGCCGCCGTTTATCGGGGTTTCCAT 6021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702333759616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |