Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14] 3,891 sequences; 39,229,750 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq3044 185 5e-45 seq1973 185 5e-45 seq793 185 5e-45 seq342 185 5e-45 seq821 167 1e-39 seq3891 158 7e-37 seq1916 152 3e-35 seq1121 152 3e-35 seq979 152 3e-35 seq902 152 3e-35 seq660 152 3e-35 seq3857 147 1e-33 seq1026 147 1e-33 seq762 143 1e-32 seq2218 140 2e-31 seq365 140 2e-31 seq3679 136 2e-30 seq13 113 3e-23 >seq3044 Length=10133 Score = 185 bits (204), Expect = 5e-45 Identities = 111/117 (95%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct 6005 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAATGATAACACCGCCC 6064 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 6065 GATCCCTAGTCGGCATGGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 6121 >seq1973 Length=862 Score = 185 bits (204), Expect = 5e-45 Identities = 111/117 (95%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct 642 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAATGATAACACCGCCC 583 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 582 GATCCCTAGTCGGCATGGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 526 >seq793 Length=1117 Score = 185 bits (204), Expect = 5e-45 Identities = 111/117 (95%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct 462 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAATGATAACACCGCCC 521 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 522 GATCCCTAGTCGGCATGGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 578 >seq342 Length=841 Score = 185 bits (204), Expect = 5e-45 Identities = 111/117 (95%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||||||||||||||| || ||||||||||||||| ||||| Sbjct 219 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAATGATAACACCGCCC 278 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 279 GATCCCTAGTCGGCATGGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 335 >seq821 Length=1482 Score = 167 bits (184), Expect = 1e-39 Identities = 107/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||| || |||| || |||| || || Sbjct 344 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATAAATTGAACACCGTCC 403 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 404 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 460 >seq3891 Length=20417 Score = 158 bits (174), Expect = 7e-37 Identities = 105/117 (90%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||| || | ||||||||||||||| ||||| Sbjct 12381 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCTGAACCGGTCAAAATGATAACACCGCCC 12322 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||| |||||||||| |||||||||||| | |||||||||||||||| || Sbjct 12321 AATCCCTAGTCAGCATAGTTTATGGTTAAGACTACAATGGTATCTGATCGTCTTTGA 12265 >seq1916 Length=9001 Score = 152 bits (168), Expect = 3e-35 Identities = 102/114 (89%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||| |||||||||| | || ||||||||||||||| |||| Sbjct 3377 GAACCCAAAAACTTTGATTTCTTGTAAGGTGCCAAACGGGTCAAAATGATAACACTGCCC 3318 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 |||||||||| ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 3317 AATCCCTAGTCAACATAGTTTATGGTTAAGACTATGACGGTATCTGATCGTCTT 3264 >seq1121 Length=10576 Score = 152 bits (168), Expect = 3e-35 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||| ||||||||||||||||||||||||| || | || || | | || || || Sbjct 6382 GAGCCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGGCATAAAAAAACCACCGTCC 6323 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 6322 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 6266 >seq979 Length=1201 Score = 152 bits (168), Expect = 3e-35 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||| ||||||||||||||||||||||||| || | || || | | || || || Sbjct 699 GAGCCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGGCATAAAAAAACCACCGTCC 758 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 759 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 815 >seq902 Length=4012 Score = 152 bits (168), Expect = 3e-35 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||| ||||||||||||||||||||||||| || | || || | | || || || Sbjct 3307 GAGCCCAAACACTTTGATTTCTCGTAAGGTGCCGAACGGGGCATAAAAAAACCACCGTCC 3366 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3367 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3423 >seq660 Length=6764 Score = 152 bits (168), Expect = 3e-35 Identities = 102/114 (89%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||| |||||||||| | | ||||||||||||||| ||||| Sbjct 2611 GAACCCAAAAACTTTGATTTCTTGTAAGGTGCCAAACAGGTCAAAATGATAACACCGCCC 2552 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 |||||||||||||||||| || ||||||||||| |||||||||||||| |||| Sbjct 2551 AATCCCTAGTCGGCATAGTCTATGGTTAAGACTAGGACGGTATCTGATCATCTT 2498 >seq3857 Length=21631 Score = 147 bits (162), Expect = 1e-33 Identities = 101/114 (89%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||| |||||||||| | | ||||||||||||||| ||||| Sbjct 19336 GAACCCAAAAACTTTGATTTCTTGTAAGGTGCCAAACAGGTCAAAATGATAACACCGCCC 19395 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 |||||| ||||||||||| || ||||||||||| |||||||||||||| |||| Sbjct 19396 AATCCCTGGTCGGCATAGTCTATGGTTAAGACTAGGACGGTATCTGATCATCTT 19449 >seq1026 Length=5605 Score = 147 bits (162), Expect = 1e-33 Identities = 101/114 (89%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||| |||||||||| | | ||||||||||||||| ||||| Sbjct 4517 GAACCCAAAAACTTTGATTTCTTGTAAGGTGCCAAACAGGTCAAAATGATAACACCGCCC 4576 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 |||||| ||||||||||| || ||||||||||| |||||||||||||| |||| Sbjct 4577 AATCCCTGGTCGGCATAGTCTATGGTTAAGACTAGGACGGTATCTGATCATCTT 4630 >seq762 Length=4351 Score = 143 bits (158), Expect = 1e-32 Identities = 102/117 (87%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||| ||||||||||||||||| ||||||| || | || || | | || || || Sbjct 3239 GAGCCCAAAAACTTTGATTTCTCGTAAAGTGCCGAACGGGGCATAAAAAAACCACCGTCC 3298 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3299 GATCCTTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3355 >seq2218 Length=1997 Score = 140 bits (154), Expect = 2e-31 Identities = 101/117 (86%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||| |||||||||| | ||||||| | |||| | || Sbjct 1162 GAACCCAAACGCTTTGATTTCTCACAAGGTGCCGATGGGGTCAAAAATAAAACACCCACC 1103 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1102 GATCCCTAGCTGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1046 >seq365 Length=35519 Score = 140 bits (154), Expect = 2e-31 Identities = 101/117 (86%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||| ||||| ||||||||||||| ||||| || | || ||| ||||||||||| ||||| Sbjct 22132 GAATCCAAAAACTTTGATTTCTCATAAGGCGCTAAACGGGTCGAAATGATAACACCGCCC 22191 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||| ||||||||||| |||||||||||| ||||||||||| |||||| || Sbjct 22192 AATCCCTAGTTGGCATAGTTTATGGTTAAGACTACAACGGTATCTGACCGTCTTTGA 22248 >seq3679 Length=2820 Score = 136 bits (150), Expect = 2e-30 Identities = 96/110 (87%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 8 AAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCT 67 || ||||||||||||||||||||||||| || | || || | | || || ||||||||| Sbjct 722 AAAACTTTGATTTCTCGTAAGGTGCCGAACGGGGCATAAAAAAACCACCGTCCGATCCCT 781 Query 68 AGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 782 AGTCCACATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 831 >seq13 Length=17595 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||||| | | |||| | |||| | || Sbjct 12237 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCGGGGTCATCGAAAGAACACCCGCC 12178 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| Sbjct 12177 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 12121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278389844490