Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14]
3,891 sequences; 39,229,750 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq3044 185 5e-45
seq1973 185 5e-45
seq793 185 5e-45
seq342 185 5e-45
seq821 167 1e-39
seq3891 158 7e-37
seq1916 152 3e-35
seq1121 152 3e-35
seq979 152 3e-35
seq902 152 3e-35
seq660 152 3e-35
seq3857 147 1e-33
seq1026 147 1e-33
seq762 143 1e-32
seq2218 140 2e-31
seq365 140 2e-31
seq3679 136 2e-30
seq13 113 3e-23
>seq3044
Length=10133
Score = 185 bits (204), Expect = 5e-45
Identities = 111/117 (95%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||| || ||||||||||||||| |||||
Sbjct 6005 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAATGATAACACCGCCC 6064
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 6065 GATCCCTAGTCGGCATGGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 6121
>seq1973
Length=862
Score = 185 bits (204), Expect = 5e-45
Identities = 111/117 (95%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||| || ||||||||||||||| |||||
Sbjct 642 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAATGATAACACCGCCC 583
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 582 GATCCCTAGTCGGCATGGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 526
>seq793
Length=1117
Score = 185 bits (204), Expect = 5e-45
Identities = 111/117 (95%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||| || ||||||||||||||| |||||
Sbjct 462 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAATGATAACACCGCCC 521
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 522 GATCCCTAGTCGGCATGGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 578
>seq342
Length=841
Score = 185 bits (204), Expect = 5e-45
Identities = 111/117 (95%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||||||||||||||| || ||||||||||||||| |||||
Sbjct 219 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAATGATAACACCGCCC 278
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 279 GATCCCTAGTCGGCATGGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 335
>seq821
Length=1482
Score = 167 bits (184), Expect = 1e-39
Identities = 107/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||||||||||||| || |||| || |||| || ||
Sbjct 344 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAACGGGTCATAAATTGAACACCGTCC 403
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 404 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 460
>seq3891
Length=20417
Score = 158 bits (174), Expect = 7e-37
Identities = 105/117 (90%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||||||||||||||||||||| || | ||||||||||||||| |||||
Sbjct 12381 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCTGAACCGGTCAAAATGATAACACCGCCC 12322
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||| |||||||||| |||||||||||| | |||||||||||||||| ||
Sbjct 12321 AATCCCTAGTCAGCATAGTTTATGGTTAAGACTACAATGGTATCTGATCGTCTTTGA 12265
>seq1916
Length=9001
Score = 152 bits (168), Expect = 3e-35
Identities = 102/114 (89%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||||||||||| |||||||||| | || ||||||||||||||| ||||
Sbjct 3377 GAACCCAAAAACTTTGATTTCTTGTAAGGTGCCAAACGGGTCAAAATGATAACACTGCCC 3318
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114
|||||||||| ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 3317 AATCCCTAGTCAACATAGTTTATGGTTAAGACTATGACGGTATCTGATCGTCTT 3264
>seq1121
Length=10576
Score = 152 bits (168), Expect = 3e-35
Identities = 104/117 (89%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| |||||| ||||||||||||||||||||||||| || | || || | | || || ||
Sbjct 6382 GAGCCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGGCATAAAAAAACCACCGTCC 6323
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 6322 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 6266
>seq979
Length=1201
Score = 152 bits (168), Expect = 3e-35
Identities = 104/117 (89%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| |||||| ||||||||||||||||||||||||| || | || || | | || || ||
Sbjct 699 GAGCCCAAAAACTTTGATTTCTCGTAAGGTGCCGAACGGGGCATAAAAAAACCACCGTCC 758
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 759 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 815
>seq902
Length=4012
Score = 152 bits (168), Expect = 3e-35
Identities = 104/117 (89%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| |||||| ||||||||||||||||||||||||| || | || || | | || || ||
Sbjct 3307 GAGCCCAAACACTTTGATTTCTCGTAAGGTGCCGAACGGGGCATAAAAAAACCACCGTCC 3366
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3367 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3423
>seq660
Length=6764
Score = 152 bits (168), Expect = 3e-35
Identities = 102/114 (89%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||||||||||| |||||||||| | | ||||||||||||||| |||||
Sbjct 2611 GAACCCAAAAACTTTGATTTCTTGTAAGGTGCCAAACAGGTCAAAATGATAACACCGCCC 2552
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114
|||||||||||||||||| || ||||||||||| |||||||||||||| ||||
Sbjct 2551 AATCCCTAGTCGGCATAGTCTATGGTTAAGACTAGGACGGTATCTGATCATCTT 2498
>seq3857
Length=21631
Score = 147 bits (162), Expect = 1e-33
Identities = 101/114 (89%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||||||||||| |||||||||| | | ||||||||||||||| |||||
Sbjct 19336 GAACCCAAAAACTTTGATTTCTTGTAAGGTGCCAAACAGGTCAAAATGATAACACCGCCC 19395
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114
|||||| ||||||||||| || ||||||||||| |||||||||||||| ||||
Sbjct 19396 AATCCCTGGTCGGCATAGTCTATGGTTAAGACTAGGACGGTATCTGATCATCTT 19449
>seq1026
Length=5605
Score = 147 bits (162), Expect = 1e-33
Identities = 101/114 (89%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||||||||||| |||||||||| | | ||||||||||||||| |||||
Sbjct 4517 GAACCCAAAAACTTTGATTTCTTGTAAGGTGCCAAACAGGTCAAAATGATAACACCGCCC 4576
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114
|||||| ||||||||||| || ||||||||||| |||||||||||||| ||||
Sbjct 4577 AATCCCTGGTCGGCATAGTCTATGGTTAAGACTAGGACGGTATCTGATCATCTT 4630
>seq762
Length=4351
Score = 143 bits (158), Expect = 1e-32
Identities = 102/117 (87%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| |||||| ||||||||||||||||| ||||||| || | || || | | || || ||
Sbjct 3239 GAGCCCAAAAACTTTGATTTCTCGTAAAGTGCCGAACGGGGCATAAAAAAACCACCGTCC 3298
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3299 GATCCTTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 3355
>seq2218
Length=1997
Score = 140 bits (154), Expect = 2e-31
Identities = 101/117 (86%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||||||||||| |||||||||| | ||||||| | |||| | ||
Sbjct 1162 GAACCCAAACGCTTTGATTTCTCACAAGGTGCCGATGGGGTCAAAAATAAAACACCCACC 1103
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1102 GATCCCTAGCTGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1046
>seq365
Length=35519
Score = 140 bits (154), Expect = 2e-31
Identities = 101/117 (86%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||| ||||| ||||||||||||| ||||| || | || ||| ||||||||||| |||||
Sbjct 22132 GAATCCAAAAACTTTGATTTCTCATAAGGCGCTAAACGGGTCGAAATGATAACACCGCCC 22191
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||| ||||||||||| |||||||||||| ||||||||||| |||||| ||
Sbjct 22192 AATCCCTAGTTGGCATAGTTTATGGTTAAGACTACAACGGTATCTGACCGTCTTTGA 22248
>seq3679
Length=2820
Score = 136 bits (150), Expect = 2e-30
Identities = 96/110 (87%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 8 AAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCT 67
|| ||||||||||||||||||||||||| || | || || | | || || |||||||||
Sbjct 722 AAAACTTTGATTTCTCGTAAGGTGCCGAACGGGGCATAAAAAAACCACCGTCCGATCCCT 781
Query 68 AGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 782 AGTCCACATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 831
>seq13
Length=17595
Score = 113 bits (124), Expect = 3e-23
Identities = 95/117 (81%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| |||||||| | | |||| | |||| | ||
Sbjct 12237 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGCGGGGTCATCGAAAGAACACCCGCC 12178
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||| ||||| |||| |||||| |||||||||| |||||||||||
Sbjct 12177 AATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTAATCGTCTTCGA 12121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278389844490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |