Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14] 3,891 sequences; 39,229,750 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1563 78.8 2e-12 >seq1563 Length=6249 Score = 78.8 bits (86), Expect = 2e-12 Identities = 105/146 (72%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||| | || | ||||||| |||||||| Sbjct 5872 ATCTGCACTGTTATTCCAATTTCACTGAGCCAATCATCGAGACAGCTGTTGTATCGTTAC 5931 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | || || ||| ||||||||||||||| | ||| Sbjct 5932 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATA 5991 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 | || |||||||||||| |||| || Sbjct 5992 GATAAGGCCGCCGTTTATCGGGGTTT 6017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062358662016