Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14] 3,891 sequences; 39,229,750 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq902 381 9e-104 seq1121 367 2e-99 seq979 367 2e-99 seq793 343 2e-92 seq3044 342 8e-92 seq13 327 2e-87 seq3857 320 3e-85 seq3212 320 3e-85 seq1916 307 2e-81 seq1026 300 3e-79 seq660 298 9e-79 seq1147 293 4e-77 seq365 291 1e-76 seq821 286 6e-75 seq2218 271 1e-70 seq762 268 1e-69 seq3891 266 5e-69 seq1206 143 4e-32 seq1973 141 1e-31 seq342 141 1e-31 >seq902 Length=4012 Score = 381 bits (422), Expect = 9e-104 Identities = 240/258 (93%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2578 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2637 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| || Sbjct 2638 ACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCGGC 2696 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| || | |||| || |||||||||||||||| ||||||||||||||||||| ||||| Sbjct 2697 GACCGACAAAAGTCAATCGGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATTA 2756 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2757 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATACAATCAAGA 2816 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 2817 AAGAGCTATCAATCTGTC 2834 >seq1121 Length=10576 Score = 367 bits (406), Expect = 2e-99 Identities = 237/258 (92%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6766 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 6707 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| || Sbjct 6706 ACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCGGC 6648 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || |||| ||| | ||||||||||||||| ||||||||||||||||||| ||||| Sbjct 6647 GGCCCACCAAAGTGAACCTGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATTA 6588 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 6587 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATACAATCAAGA 6528 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 6527 AAGAGCTATCAATCTGTC 6510 >seq979 Length=1201 Score = 367 bits (406), Expect = 2e-99 Identities = 237/258 (92%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 315 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 374 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| || Sbjct 375 ACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCGGC 433 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || || | |||| | ||||||||||||||| ||||||||||||||||||| ||||| Sbjct 434 GGCCGACAAAAGTCAACCTGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATTA 493 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 494 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATACAATCAAGA 553 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 554 AAGAGCTATCAATCTGTC 571 >seq793 Length=1117 Score = 343 bits (380), Expect = 2e-92 Identities = 231/257 (90%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| |||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct 79 ACTCGTTGGCTCTGTCAGTGTAGCGCGAGTGCGGCCCAGAGCATCTAAGGGCATCACAGA 138 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 139 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 197 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| || | | ||||||||||||||||||||||||||||||||||| |||||| Sbjct 198 ACCCGCCGGGGCGGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 257 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 258 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAGAA 317 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 318 AGAGCTCTCAATCTGTC 334 >seq3044 Length=10133 Score = 342 bits (378), Expect = 8e-92 Identities = 230/257 (89%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 5622 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAGCATCTAAGGGCATCACAGA 5681 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 5682 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 5740 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| || | | |||||||| ||||||||||| |||||||||||||| |||||| Sbjct 5741 ACCCGCCGGGGCGGGCCYGGCTATTTWGCAGGTTAAGGKCTCGTTCGTTATCGCAATTAA 5800 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 5801 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAGAA 5860 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 5861 AGAGCTCTCAATCTGTC 5877 >seq13 Length=17595 Score = 327 bits (362), Expect = 2e-87 Identities = 228/258 (88%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12621 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 12562 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||| | ||| | | || ||||||||||||||| || Sbjct 12561 ACCTGTTATTGCCTCAAACTTCCTTATGCTTGCACATAA-AGTCCCTCTAAGAAGTTAGA 12503 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | || | | | | | ||| |||||||||||||||||||||||||| |||||||| Sbjct 12502 CCCCTATTTTCATAAAGGTAACTAGTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTA 12443 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12442 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 12383 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 12382 AAGAGCTCTCAATCTGTC 12365 >seq3857 Length=21631 Score = 320 bits (354), Expect = 3e-85 Identities = 226/257 (88%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||| ||||| | ||||||||||| Sbjct 18953 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAGCATCTCAAGGCATCACAGA 19012 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||||||||||| || ||| ||||||||||||||||||| || Sbjct 19013 CCTGTTATTGCCTCAAACTTCCATTGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCA 19071 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| || | | |||||||||||| ||||||||| || ||||||| |||||| Sbjct 19072 ACCCGCCGGGGCAGGCCTGGCTATTTAGCAAATTAAGGTCTTATTTGTTATCGCAATTAA 19131 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 19132 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAGAA 19191 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 19192 AGAGCTCTCAATCTGTC 19208 >seq3212 Length=6244 Score = 320 bits (354), Expect = 3e-85 Identities = 226/257 (88%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||| ||||| | ||||||||||| Sbjct 311 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAGCATCTCAAGGCATCACAGA 252 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||||||||||| || ||| ||||||||||||||||||| || Sbjct 251 CCTGTTATTGCCTCAAACTTCCATTGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCA 193 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| || | | |||||||||||| ||||||||| || ||||||| |||||| Sbjct 192 ACCCGCCGGGGCAGGCCTGGCTATTTAGCAAATTAAGGTCTTATTTGTTATCGCAATTAA 133 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 132 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAGAA 73 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 72 AGAGCTCTCAATCTGTC 56 >seq1916 Length=9001 Score = 307 bits (340), Expect = 2e-81 Identities = 223/257 (87%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| |||||||||||||| |||||||||||| ||||||||| |||||||| Sbjct 3760 ACTCGTTGGCTCTGTCAGTGTAGCGCGTGTGCGGCCCAGAGCATCTAAGGATATCACAGA 3701 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||| ||||||||||| || ||| || ||||||||||||||||||||||| || Sbjct 3700 CCTGTTATTACCTCAAACTTCTATCAGCTTGA-GCCAATAGTCCCTCTAAGAAGCCGGCA 3642 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| || | | |||||||||||||||||||||||| || ||||| |||||| Sbjct 3641 ACCCGCCGGGGCGGGCCTGGCTATTTAGCAGGTTAAGGTCTCATTTGTTATTACAATTAA 3582 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 3581 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAGAA 3522 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 3521 AGAGCTCTCAATCTGTC 3505 >seq1026 Length=5605 Score = 300 bits (332), Expect = 3e-79 Identities = 221/257 (86%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||| ||||| | ||||||||||| Sbjct 4134 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAGCATCTCAAGGCATCACAGA 4193 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 || || |||||| |||||||||||||||| || ||| ||||||||||||||||||| || Sbjct 4194 CCGGTGATTGCCGCAAACTTCCATTGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCA 4252 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| || | | |||||||||||| ||||||||| || | ||||| |||||| Sbjct 4253 ACCCGCCGGGGCAGGCCTGGCTATTTAGCAAATTAAGGTCTTATTTGGTATCGCAATTAA 4312 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| Sbjct 4313 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCARGAA 4372 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 4373 AGAGCTCTCAATCTGTC 4389 >seq660 Length=6764 Score = 298 bits (330), Expect = 9e-79 Identities = 221/257 (86%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||| ||||||||||||| ||||| | ||||||||||| Sbjct 2994 ACTCGTTGGCTCTGTCAGTGTAGCGCACGTGCGGCCCAGAGCATCTCAAGGCATCACAGA 2935 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||||||||||| || ||| ||||||||||||||||||| || Sbjct 2934 CCTGTTATTGCCTCAAACTTCCATTGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCA 2876 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| || || | |||||||||| | ||||||||| || ||||||| |||||| Sbjct 2875 ACCCGCCGGGGTAGGCCTGGCTATTTAGTAAATTAAGGTCTTATTTGTTATCGTAATTAA 2816 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||| |||||||||||| ||||||||| ||||||||||||||||||| | ||||||||| Sbjct 2815 GTAGATAAATCACTCCACTAACTAAGAATGGCCATGCACCACCACCCACATAATCAAGAA 2756 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 2755 AGAGCTCTCAATCTGTC 2739 >seq1147 Length=2975 Score = 293 bits (324), Expect = 4e-77 Identities = 197/219 (90%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 48 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCT 107 |||||||||||||||||||||||||||| ||||||||||||| || ||||| ||||||| Sbjct 377 AAGGGCATCACAGACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCT 319 Query 108 CTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTC 167 |||||||||| || |||| | |||| | ||||||||||||||| |||||||||||| Sbjct 318 CTAAGAAGCCGGCGGTCAACAAAAGTCAACCTGGCTATTTAGCAGGTCAAGGTCTCGTTC 259 Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 258 GTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 199 Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCG 266 |||| |||||||||||||||||||||||||| ||||| Sbjct 198 CATAAAATCAAGAAAGAGCTATCAATCTGTCAATCCTCG 160 Score = 78.8 bits (86), Expect = 1e-12 Identities = 46/48 (96%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA 48 |||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 640 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA 593 >seq365 Length=35519 Score = 291 bits (322), Expect = 1e-76 Identities = 213/246 (87%), Gaps = 1/246 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||| | ||||||||||| ||||||||||||||||||| Sbjct 29957 ACTCGTTGGCTCTGTCAGTGTAGCGCACATGCGGCCCAGAGCATCTAAGGGCATCACAGA 29898 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 ||||||||||||||||||||| ||||||| |||| |||||||||||||||||| || Sbjct 29897 CCTGTTATTGCCTCAAACTTCTATTGGCTT-AAGCTGATAGTCCCTCTAAGAAGCTGGCA 29839 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | | | ||||||||||||||||||||||| ||| ||||| | |||||| Sbjct 29838 ACCCGCTGGGGCAGGCCTGGCTATTTAGCAGGTTAAGGTCTTGTTTGTTATTGCAATTAA 29779 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 |||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| Sbjct 29778 GCAGACAAATCACTCCACCAACTAAGAACGGCCATACACCACCACCCACATAATCAAGAA 29719 Query 242 AGAGCT 247 |||||| Sbjct 29718 AGAGCT 29713 >seq821 Length=1482 Score = 286 bits (316), Expect = 6e-75 Identities = 193/216 (89%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 43 CATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAG 102 ||||||||||||||||||||||||||||||||||||||||| | | || | | | | || Sbjct 1 CATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCCTCGACTAAACGTCGAGAG 60 Query 103 TCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCT 162 |||||||||||||||||| ||| ||| || || |||||||||||||||||||||||| Sbjct 61 TCCCTCTAAGAAGCCAGCGGCCAGCCAAAGCCGGCCGGGCTATTTAGCAGGTTAAGGTCT 120 Query 163 CGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCA 222 |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 121 CGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCA 180 Query 223 CCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||| ||| | ||||||||||||||||||||||||| Sbjct 181 CCAACCACAAGATCAAGAAAGAGCTATCAATCTGTC 216 >seq2218 Length=1997 Score = 271 bits (300), Expect = 1e-70 Identities = 187/210 (89%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 49 AGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTC 108 ||||||||||||||||||| ||||||||||||||| | |||| || ||| |||||||||| Sbjct 1498 AGGGCATCACAGACCTGTTTTTGCCTCAAACTTCCTTCGGCTTGA-GCCGATAGTCCCTC 1440 Query 109 TAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCG 168 ||||||||| || |||| ||| || ||||||||||||||||||||||||||||| Sbjct 1439 TAAGAAGCCTGCGACCAGCCAAAGCTAGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCG 1380 Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 |||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1379 TTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAAAACGGCCATGCACCACCACCC 1320 Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | | ||||||||||||||| |||||||||| Sbjct 1319 AAAAAATCAAGAAAGAGCTCTCAATCTGTC 1290 Score = 78.8 bits (86), Expect = 1e-12 Identities = 46/48 (96%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA 48 |||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 1730 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA 1683 >seq762 Length=4351 Score = 268 bits (296), Expect = 1e-69 Identities = 179/198 (90%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| || Sbjct 2219 ACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCGGC 2277 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || || | |||| | ||||||||||||||| ||||||||||||||||||| ||||| Sbjct 2278 GGCCGACAAAAGTCAACCTGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATTA 2337 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2338 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATACAATCAAGA 2397 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 2398 AAGAGCTATCAATCTGTC 2415 Score = 100 bits (110), Expect = 5e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1823 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 1882 >seq3891 Length=20417 Score = 266 bits (294), Expect = 5e-69 Identities = 202/237 (85%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 22 TAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 81 ||| | |||||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct 12744 TAGTGTGCGTGCGGCCCAGAGCATCTAAGGGCATCACAGACCTATTATTGCCTCAAACTT 12685 Query 82 CCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGG 141 | ||| ||| || || |||||||||||||||||| | ||| ||| | | || Sbjct 12684 CTATTAGCTT-AATCCGATAGTCCCTCTAAGAAGCTGGTGACCTGCCAGGGCAGGCCTGG 12626 Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||||||||||||||||||||||| |||| | |||||| ||| |||||||||||||| Sbjct 12625 CTATTTAGCAGGTTAAGGTCTCGTTTATTATTGCAATTAAGTAGATAAATCACTCCACCA 12566 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| | |||||||||||||| |||||||||| Sbjct 12565 ACTAAGAACGGCCATGCACCACCACCCACATAATCAAGAAAGAGCCCTCAATCTGTC 12509 >seq1206 Length=1316 Score = 143 bits (158), Expect = 4e-32 Identities = 87/92 (95%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1225 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAGCATCTAAGGGCATCACAGA 1284 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGA 93 |||||||||||||||||||||||| |||| || Sbjct 1285 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA 1316 >seq1973 Length=862 Score = 141 bits (156), Expect = 1e-31 Identities = 86/91 (95%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 860 GTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 801 Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTC 258 || | ||||||||||||||| |||||||||| Sbjct 800 CACATAATCAAGAAAGAGCTCTCAATCTGTC 770 >seq342 Length=841 Score = 141 bits (156), Expect = 1e-31 Identities = 86/91 (95%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 60 Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTC 258 || | ||||||||||||||| |||||||||| Sbjct 61 CACATAATCAAGAAAGAGCTCTCAATCTGTC 91 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796769965371