Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14]
3,891 sequences; 39,229,750 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq902 381 9e-104
seq1121 367 2e-99
seq979 367 2e-99
seq793 343 2e-92
seq3044 342 8e-92
seq13 327 2e-87
seq3857 320 3e-85
seq3212 320 3e-85
seq1916 307 2e-81
seq1026 300 3e-79
seq660 298 9e-79
seq1147 293 4e-77
seq365 291 1e-76
seq821 286 6e-75
seq2218 271 1e-70
seq762 268 1e-69
seq3891 266 5e-69
seq1206 143 4e-32
seq1973 141 1e-31
seq342 141 1e-31
>seq902
Length=4012
Score = 381 bits (422), Expect = 9e-104
Identities = 240/258 (93%), Gaps = 1/258 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2578 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2637
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| ||
Sbjct 2638 ACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCGGC 2696
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
||| || | |||| || |||||||||||||||| ||||||||||||||||||| |||||
Sbjct 2697 GACCGACAAAAGTCAATCGGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATTA 2756
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2757 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATACAATCAAGA 2816
Query 241 AAGAGCTATCAATCTGTC 258
||||||||||||||||||
Sbjct 2817 AAGAGCTATCAATCTGTC 2834
>seq1121
Length=10576
Score = 367 bits (406), Expect = 2e-99
Identities = 237/258 (92%), Gaps = 1/258 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6766 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 6707
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| ||
Sbjct 6706 ACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCGGC 6648
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|| |||| ||| | ||||||||||||||| ||||||||||||||||||| |||||
Sbjct 6647 GGCCCACCAAAGTGAACCTGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATTA 6588
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 6587 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATACAATCAAGA 6528
Query 241 AAGAGCTATCAATCTGTC 258
||||||||||||||||||
Sbjct 6527 AAGAGCTATCAATCTGTC 6510
>seq979
Length=1201
Score = 367 bits (406), Expect = 2e-99
Identities = 237/258 (92%), Gaps = 1/258 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 315 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 374
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| ||
Sbjct 375 ACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCGGC 433
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|| || | |||| | ||||||||||||||| ||||||||||||||||||| |||||
Sbjct 434 GGCCGACAAAAGTCAACCTGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATTA 493
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 494 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATACAATCAAGA 553
Query 241 AAGAGCTATCAATCTGTC 258
||||||||||||||||||
Sbjct 554 AAGAGCTATCAATCTGTC 571
>seq793
Length=1117
Score = 343 bits (380), Expect = 2e-92
Identities = 231/257 (90%), Gaps = 1/257 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 79 ACTCGTTGGCTCTGTCAGTGTAGCGCGAGTGCGGCCCAGAGCATCTAAGGGCATCACAGA 138
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 139 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 197
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| || | | ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 198 ACCCGCCGGGGCGGGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 257
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 258 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAGAA 317
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 318 AGAGCTCTCAATCTGTC 334
>seq3044
Length=10133
Score = 342 bits (378), Expect = 8e-92
Identities = 230/257 (89%), Gaps = 1/257 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 5622 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAGCATCTAAGGGCATCACAGA 5681
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 5682 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 5740
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| || | | |||||||| ||||||||||| |||||||||||||| ||||||
Sbjct 5741 ACCCGCCGGGGCGGGCCYGGCTATTTWGCAGGTTAAGGKCTCGTTCGTTATCGCAATTAA 5800
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 5801 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAGAA 5860
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 5861 AGAGCTCTCAATCTGTC 5877
>seq13
Length=17595
Score = 327 bits (362), Expect = 2e-87
Identities = 228/258 (88%), Gaps = 1/258 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 12621 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 12562
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||| | ||| | | || ||||||||||||||| ||
Sbjct 12561 ACCTGTTATTGCCTCAAACTTCCTTATGCTTGCACATAA-AGTCCCTCTAAGAAGTTAGA 12503
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| || | | | | | ||| |||||||||||||||||||||||||| ||||||||
Sbjct 12502 CCCCTATTTTCATAAAGGTAACTAGTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTA 12443
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 12442 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 12383
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 12382 AAGAGCTCTCAATCTGTC 12365
>seq3857
Length=21631
Score = 320 bits (354), Expect = 3e-85
Identities = 226/257 (88%), Gaps = 1/257 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| ||||||||||||||||||||||||||| ||||| | |||||||||||
Sbjct 18953 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAGCATCTCAAGGCATCACAGA 19012
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
||||||||||||||||||||||||||||| || ||| ||||||||||||||||||| ||
Sbjct 19013 CCTGTTATTGCCTCAAACTTCCATTGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCA 19071
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| || | | |||||||||||| ||||||||| || ||||||| ||||||
Sbjct 19072 ACCCGCCGGGGCAGGCCTGGCTATTTAGCAAATTAAGGTCTTATTTGTTATCGCAATTAA 19131
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 19132 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAGAA 19191
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 19192 AGAGCTCTCAATCTGTC 19208
>seq3212
Length=6244
Score = 320 bits (354), Expect = 3e-85
Identities = 226/257 (88%), Gaps = 1/257 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| ||||||||||||||||||||||||||| ||||| | |||||||||||
Sbjct 311 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAGCATCTCAAGGCATCACAGA 252
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
||||||||||||||||||||||||||||| || ||| ||||||||||||||||||| ||
Sbjct 251 CCTGTTATTGCCTCAAACTTCCATTGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCA 193
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| || | | |||||||||||| ||||||||| || ||||||| ||||||
Sbjct 192 ACCCGCCGGGGCAGGCCTGGCTATTTAGCAAATTAAGGTCTTATTTGTTATCGCAATTAA 133
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 132 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAGAA 73
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 72 AGAGCTCTCAATCTGTC 56
>seq1916
Length=9001
Score = 307 bits (340), Expect = 2e-81
Identities = 223/257 (87%), Gaps = 1/257 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||| |||||||||||| ||||||||| ||||||||
Sbjct 3760 ACTCGTTGGCTCTGTCAGTGTAGCGCGTGTGCGGCCCAGAGCATCTAAGGATATCACAGA 3701
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
||||||||| ||||||||||| || ||| || ||||||||||||||||||||||| ||
Sbjct 3700 CCTGTTATTACCTCAAACTTCTATCAGCTTGA-GCCAATAGTCCCTCTAAGAAGCCGGCA 3642
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| || | | |||||||||||||||||||||||| || ||||| ||||||
Sbjct 3641 ACCCGCCGGGGCGGGCCTGGCTATTTAGCAGGTTAAGGTCTCATTTGTTATTACAATTAA 3582
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 3581 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAGAA 3522
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 3521 AGAGCTCTCAATCTGTC 3505
>seq1026
Length=5605
Score = 300 bits (332), Expect = 3e-79
Identities = 221/257 (86%), Gaps = 1/257 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| ||||||||||||||||||||||||||| ||||| | |||||||||||
Sbjct 4134 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAGCATCTCAAGGCATCACAGA 4193
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|| || |||||| |||||||||||||||| || ||| ||||||||||||||||||| ||
Sbjct 4194 CCGGTGATTGCCGCAAACTTCCATTGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCA 4252
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| || | | |||||||||||| ||||||||| || | ||||| ||||||
Sbjct 4253 ACCCGCCGGGGCAGGCCTGGCTATTTAGCAAATTAAGGTCTTATTTGGTATCGCAATTAA 4312
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||
Sbjct 4313 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCARGAA 4372
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 4373 AGAGCTCTCAATCTGTC 4389
>seq660
Length=6764
Score = 298 bits (330), Expect = 9e-79
Identities = 221/257 (86%), Gaps = 1/257 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| ||||||||||||| ||||||||||||| ||||| | |||||||||||
Sbjct 2994 ACTCGTTGGCTCTGTCAGTGTAGCGCACGTGCGGCCCAGAGCATCTCAAGGCATCACAGA 2935
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
||||||||||||||||||||||||||||| || ||| ||||||||||||||||||| ||
Sbjct 2934 CCTGTTATTGCCTCAAACTTCCATTGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCA 2876
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| || || | |||||||||| | ||||||||| || ||||||| ||||||
Sbjct 2875 ACCCGCCGGGGTAGGCCTGGCTATTTAGTAAATTAAGGTCTTATTTGTTATCGTAATTAA 2816
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||| |||||||||||| ||||||||| ||||||||||||||||||| | |||||||||
Sbjct 2815 GTAGATAAATCACTCCACTAACTAAGAATGGCCATGCACCACCACCCACATAATCAAGAA 2756
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 2755 AGAGCTCTCAATCTGTC 2739
>seq1147
Length=2975
Score = 293 bits (324), Expect = 4e-77
Identities = 197/219 (90%), Gaps = 1/219 (0%)
Strand=Plus/Minus
Query 48 AAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCT 107
|||||||||||||||||||||||||||| ||||||||||||| || ||||| |||||||
Sbjct 377 AAGGGCATCACAGACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCT 319
Query 108 CTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTC 167
|||||||||| || |||| | |||| | ||||||||||||||| ||||||||||||
Sbjct 318 CTAAGAAGCCGGCGGTCAACAAAAGTCAACCTGGCTATTTAGCAGGTCAAGGTCTCGTTC 259
Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 258 GTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 199
Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCG 266
|||| |||||||||||||||||||||||||| |||||
Sbjct 198 CATAAAATCAAGAAAGAGCTATCAATCTGTCAATCCTCG 160
Score = 78.8 bits (86), Expect = 1e-12
Identities = 46/48 (96%), Gaps = 0/48 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA 48
|||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 640 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA 593
>seq365
Length=35519
Score = 291 bits (322), Expect = 1e-76
Identities = 213/246 (87%), Gaps = 1/246 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| ||||||||||||| | ||||||||||| |||||||||||||||||||
Sbjct 29957 ACTCGTTGGCTCTGTCAGTGTAGCGCACATGCGGCCCAGAGCATCTAAGGGCATCACAGA 29898
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
||||||||||||||||||||| ||||||| |||| |||||||||||||||||| ||
Sbjct 29897 CCTGTTATTGCCTCAAACTTCTATTGGCTT-AAGCTGATAGTCCCTCTAAGAAGCTGGCA 29839
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| | | | ||||||||||||||||||||||| ||| ||||| | ||||||
Sbjct 29838 ACCCGCTGGGGCAGGCCTGGCTATTTAGCAGGTTAAGGTCTTGTTTGTTATTGCAATTAA 29779
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
|||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||
Sbjct 29778 GCAGACAAATCACTCCACCAACTAAGAACGGCCATACACCACCACCCACATAATCAAGAA 29719
Query 242 AGAGCT 247
||||||
Sbjct 29718 AGAGCT 29713
>seq821
Length=1482
Score = 286 bits (316), Expect = 6e-75
Identities = 193/216 (89%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 43 CATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAG 102
||||||||||||||||||||||||||||||||||||||||| | | || | | | | ||
Sbjct 1 CATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCCTCGACTAAACGTCGAGAG 60
Query 103 TCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCT 162
|||||||||||||||||| ||| ||| || || ||||||||||||||||||||||||
Sbjct 61 TCCCTCTAAGAAGCCAGCGGCCAGCCAAAGCCGGCCGGGCTATTTAGCAGGTTAAGGTCT 120
Query 163 CGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCA 222
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCA 180
Query 223 CCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||| ||| | |||||||||||||||||||||||||
Sbjct 181 CCAACCACAAGATCAAGAAAGAGCTATCAATCTGTC 216
>seq2218
Length=1997
Score = 271 bits (300), Expect = 1e-70
Identities = 187/210 (89%), Gaps = 1/210 (0%)
Strand=Plus/Minus
Query 49 AGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTC 108
||||||||||||||||||| ||||||||||||||| | |||| || ||| ||||||||||
Sbjct 1498 AGGGCATCACAGACCTGTTTTTGCCTCAAACTTCCTTCGGCTTGA-GCCGATAGTCCCTC 1440
Query 109 TAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCG 168
||||||||| || |||| ||| || |||||||||||||||||||||||||||||
Sbjct 1439 TAAGAAGCCTGCGACCAGCCAAAGCTAGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCG 1380
Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228
|||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1379 TTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAAAACGGCCATGCACCACCACCC 1320
Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGTC 258
| | ||||||||||||||| ||||||||||
Sbjct 1319 AAAAAATCAAGAAAGAGCTCTCAATCTGTC 1290
Score = 78.8 bits (86), Expect = 1e-12
Identities = 46/48 (96%), Gaps = 0/48 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA 48
|||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 1730 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTA 1683
>seq762
Length=4351
Score = 268 bits (296), Expect = 1e-69
Identities = 179/198 (90%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||| ||||||||||||| || ||||| ||||||||||||||||| ||
Sbjct 2219 ACCTGTTATTGCCTCGTACTTCCATTGGCTTGA-GCCAAAAGTCCCTCTAAGAAGCCGGC 2277
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|| || | |||| | ||||||||||||||| ||||||||||||||||||| |||||
Sbjct 2278 GGCCGACAAAAGTCAACCTGGCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGCAATTA 2337
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2338 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATACAATCAAGA 2397
Query 241 AAGAGCTATCAATCTGTC 258
||||||||||||||||||
Sbjct 2398 AAGAGCTATCAATCTGTC 2415
Score = 100 bits (110), Expect = 5e-19
Identities = 58/60 (97%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1823 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 1882
>seq3891
Length=20417
Score = 266 bits (294), Expect = 5e-69
Identities = 202/237 (85%), Gaps = 1/237 (0%)
Strand=Plus/Minus
Query 22 TAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 81
||| | |||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 12744 TAGTGTGCGTGCGGCCCAGAGCATCTAAGGGCATCACAGACCTATTATTGCCTCAAACTT 12685
Query 82 CCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGG 141
| ||| ||| || || |||||||||||||||||| | ||| ||| | | ||
Sbjct 12684 CTATTAGCTT-AATCCGATAGTCCCTCTAAGAAGCTGGTGACCTGCCAGGGCAGGCCTGG 12626
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||||||||||||||||||||||||| |||| | |||||| ||| ||||||||||||||
Sbjct 12625 CTATTTAGCAGGTTAAGGTCTCGTTTATTATTGCAATTAAGTAGATAAATCACTCCACCA 12566
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| | |||||||||||||| ||||||||||
Sbjct 12565 ACTAAGAACGGCCATGCACCACCACCCACATAATCAAGAAAGAGCCCTCAATCTGTC 12509
>seq1206
Length=1316
Score = 143 bits (158), Expect = 4e-32
Identities = 87/92 (95%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1225 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAGCATCTAAGGGCATCACAGA 1284
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGA 93
|||||||||||||||||||||||| |||| ||
Sbjct 1285 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA 1316
>seq1973
Length=862
Score = 141 bits (156), Expect = 1e-31
Identities = 86/91 (95%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 860 GTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 801
Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|| | ||||||||||||||| ||||||||||
Sbjct 800 CACATAATCAAGAAAGAGCTCTCAATCTGTC 770
>seq342
Length=841
Score = 141 bits (156), Expect = 1e-31
Identities = 86/91 (95%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 168 GTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 227
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACC 60
Query 228 CATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|| | ||||||||||||||| ||||||||||
Sbjct 61 CACATAATCAAGAAAGAGCTCTCAATCTGTC 91
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796769965371
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |