Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Umbilicaria_20pustulata_20[genbank_20GCA_5F900169345.1_202017-04-14] 3,891 sequences; 39,229,750 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1181 338 1e-90 seq148 334 1e-89 seq1026 333 4e-89 seq3044 329 5e-88 seq1207 329 5e-88 seq872 315 1e-83 seq3211 275 1e-71 seq1714 269 4e-70 seq1098 269 4e-70 seq1916 259 8e-67 seq13 253 3e-65 seq365 242 6e-62 seq3891 233 3e-59 seq1215 233 3e-59 seq1248 223 6e-56 seq512 223 6e-56 seq3851 221 2e-55 seq1121 219 7e-55 >seq1181 Length=1632 Score = 338 bits (374), Expect = 1e-90 Identities = 246/280 (88%), Gaps = 5/280 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 1598 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1541 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1540 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCG 1481 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 | ||| || ||||| | || ||||||||||||||||||||||||||| || ||||| | Sbjct 1480 GGACGCGGCGATTCGCCCCCGCACATCGTAGTCGGATACGAATAGGCCTCCAGGCCCTGG 1421 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTG 238 |||||||| |||||||| || | | | ||||| | |||||| |||| ||||||||| Sbjct 1420 ACCTTAGCGGGCCGGCAGTGGCCCCCGGGTGGAAGGCCCGGGCGC-CAGCCGGCGGATTG 1362 Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||||||||||||| ||||||||||||||||| ||||| Sbjct 1361 CAATTTCACCATGCGCGGGGATAAATCCTTTGCACACGAC 1322 >seq148 Length=1774 Score = 334 bits (370), Expect = 1e-89 Identities = 247/281 (88%), Gaps = 7/281 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 1602 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1545 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1544 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCG 1485 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 | ||| || ||||| | || ||||||||||||||||||||||||||| | ||||| | Sbjct 1484 GGACGCGGCGATTCGCCCCCGCACATCGTAGTCGGATACGAATAGGCCYCCGGGCCCTGG 1425 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCC-CGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 |||||||| ||||||| | |||| || | ||||| | |||||| |||| |||||||| Sbjct 1424 ACCTTAGCGGGCCGGC-AGTGGCGCCCGGGTGGAAGTCCCGGGCGC-CAGCCGGCGGATT 1367 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||||||||||||| ||||||||||||||||| ||||| Sbjct 1366 GCAATTTCACCATGCGCGGGGATAAATCCTTTGCACACGAC 1326 >seq1026 Length=5605 Score = 333 bits (368), Expect = 4e-89 Identities = 247/281 (88%), Gaps = 7/281 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 805 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 748 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 747 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCG 688 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 | ||| || ||||| | || ||||||||||||||||||||||||||| || ||||| | Sbjct 687 GGACGCGGCGATTCGCCCCCGCACATCGTAGTCGGATACGAATAGGCCTCCAGGCCCTGG 628 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCC-CGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 |||||||| ||||||| | |||| || | ||||| | |||||| |||| ||||| || Sbjct 627 ACCTTAGCGGGCCGGC-AGTGGCGCCCGGGGGGAAGTCCCGGGCGC-CAGCCGGCGGGTT 570 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||||||||||||| ||||||||||||||||| ||||| Sbjct 569 GCAATTTCACCATGCGCGGGGATAAATCCTTTGCACACGAC 529 >seq3044 Length=10133 Score = 329 bits (364), Expect = 5e-88 Identities = 245/281 (87%), Gaps = 7/281 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 1824 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1767 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1766 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCG 1707 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 | ||| || ||||| | || ||||||||||||||||||||||||||| || ||||| | Sbjct 1706 GGACGCGGCGATTCGCCCCCGCACATCGTAGTCGGATACGAATAGGCCTCCAGGCCCTGG 1647 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCC-CGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 |||| || ||||||| | |||| || | || || | |||||| |||| |||||||| Sbjct 1646 MCCTTRGCGGGCCGGC-AGTGGCGCCCGGGKGGRAGTCCCGGGCGC-CAGCCGGCGGATT 1589 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||||||||||||| ||||||||||||||||| ||||| Sbjct 1588 GCAATTTCACCATGCGCGGGGATAAATCCTTTGCACACGAC 1548 >seq1207 Length=2108 Score = 329 bits (364), Expect = 5e-88 Identities = 246/281 (88%), Gaps = 7/281 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| |||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 2102 GTACAAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 2045 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2044 GCCGCGAAGCTACCATCTGCTGTATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCG 1985 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 | ||| || ||||| | || ||||||||||||||||||||||||||| || ||||| | Sbjct 1984 GGACGCGGCGATTCGCCCCCGCACATCGTAGTCGGATACGAATAGGCCTCCAGGCCCTGG 1925 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCC-CGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 |||||||| ||||||| | |||| || | ||||| | |||||| |||| |||||||| Sbjct 1924 ACCTTAGCGGGCCGGC-AGTGGCGCCCGGGTGGAAGTCCCGGGCGC-CAGCCGGCGGATT 1867 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||||||||||||| ||||||||||||||||| ||||| Sbjct 1866 GCAATTTCACCATGCGCGGGGATAAATCCTTTGCACACGAC 1826 >seq872 Length=1590 Score = 315 bits (348), Expect = 1e-83 Identities = 243/281 (86%), Gaps = 7/281 (2%) Strand=Plus/Minus Query 3 ACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGC 62 ||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||||| Sbjct 1590 ACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGTGC 1533 Query 63 CGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGA 122 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1532 CGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCGGG 1473 Query 123 ACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGAAC 180 ||| || ||||| | || ||||||||||||||||||||||||||| || ||||| | || Sbjct 1472 ACGCGGCGATTCCCCCCCGCACATCGTAGTCGGATACGAATAGGCCTCCAGGCCCTGGAC 1413 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCC-GCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 |||| | |||||| || | || ||| | |||||| | |||||| |||| ||||| |||| Sbjct 1412 CTTATCGGGCCGG-AAGGCGCCCCCCGGGGGAAGCCCCGGGCGC-CAGCCGGCGGCTTGC 1355 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGACCT 280 | ||| |||||||| |||| |||||||||||| ||||||| Sbjct 1354 CAATTCCCCATGCGCCGGGACAAATCCTTTGCACACGACCT 1314 >seq3211 Length=3972 Score = 275 bits (304), Expect = 1e-71 Identities = 234/281 (83%), Gaps = 7/281 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || | |||| ||||||||||||||||||||| |||| | |||| Sbjct 1943 GTACGAGAGGAACCGTTGA-TCCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGCCAGT 2000 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||| |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||| Sbjct 2001 GCCCCGAAGCTACCATCTGCTGAATTATGGCTGAATGCCTCTAAGTCGGAATCCATGCCG 2060 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 | | | || |||| | ||||||||| ||||| |||||| ||||||| || ||||| | Sbjct 2061 GGAGGCGGCAATTCCCCCCTGCACATTGTAGTTGGATACAAATAGGCCTCCAGGCCCTGG 2120 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCC-CGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 || ||||| ||| ||| | ||||||| | ||||| | || ||| |||| |||||||| Sbjct 2121 ACTTTAGCGGGCTGGC-AGTGGCGTCCAGGTGGAAGTCCCGGACGC-CAGCCGGCGGATT 2178 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||||||||| ||| ||||||||||||||||| || || Sbjct 2179 GCAATTTCACCATACGCGGGGATAAATCCTTTGCACACAAC 2219 >seq1714 Length=35392 Score = 269 bits (298), Expect = 4e-70 Identities = 231/278 (83%), Gaps = 7/278 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| |||||||||| || | |||| ||||||||||||||||||||| |||| | |||| Sbjct 34005 GTACAAGAGGAACCGTTGA-TCCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGCCAGT 34062 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||| Sbjct 34063 GCCGCGAAGCTACCATCTGCTGAATTATGGCTGAATGCCTCTAAGTCGGAATCCATGCCG 34122 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 | | | || |||| | ||||||||| ||||| |||||| ||||||| || ||||| | Sbjct 34123 GGAGGCGGCAATTCCCCCCTGCACATTGTAGTTGGATACAAATAGGCCTCCAGGCCCTGG 34182 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCC-CGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 || ||||| ||| ||| | ||||||| | ||||| | || ||| |||| |||||||| Sbjct 34183 ACTTTAGCGGGCTGGC-AGTGGCGTCCAGGTGGAAGTCCCGGACGC-CAGCCGGCGGATT 34240 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGAC 275 | ||||||||||| ||| ||||||||||||||||| || Sbjct 34241 GTAATTTCACCATACGCGGGGATAAATCCTTTGCACAC 34278 >seq1098 Length=7529 Score = 269 bits (298), Expect = 4e-70 Identities = 233/281 (83%), Gaps = 7/281 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || | |||| ||||||||||||||||||||| |||| | |||| Sbjct 5452 GTACGAGAGGAACCGTCGA-TCCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGCCAGT 5509 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||| |||||||| ||||||| |||||||||||| ||||||||||||||||||||||| Sbjct 5510 GCCGCAAAGCTACCGTCTGCTGAATTATGGCTGAATGCCTCTAAGTCAGAATCCATGCCG 5569 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 | | | | |||| | ||||||||| |||||||||||| ||||||| || ||||| | Sbjct 5570 GGAGGCAGCAATTCCCCCCTGCACATTGTAGTCGGATACAAATAGGCCTCCAGGCCCTGG 5629 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCC-CGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 || ||||| ||||||| | ||||||| | ||||| | || | ||||| ||| |||| Sbjct 5630 ACTTTAGCGGGCCGGC-AGTGGCGTCCAGGTGGAAGTCCCGGATG-TCAGCCGGCAGATT 5687 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||||||||| ||| ||||||||||||||||| || || Sbjct 5688 GCAATTTCACCATACGCGGGGATAAATCCTTTGCACACAAC 5728 >seq1916 Length=9001 Score = 259 bits (286), Expect = 8e-67 Identities = 228/276 (83%), Gaps = 9/276 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||| ||||||| | || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 7499 GTACGTGAGGAACTGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 7556 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 7557 GCCGCAAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 7616 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 | | | || ||||| | | ||||||| || || ||||||| ||||| || ||||| | Sbjct 7617 GGATGTGGCGATTCCCCCTCGCACATCATACTCAGATACGAGTAGGCCTCCAGGCCCTGG 7676 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCG--GAAGCGCGGGGCGCTCAGCTGGCGGAT 236 ||||||| |||||||| | |||| || | | |||| | ||| || ||||||| ||| Sbjct 7677 ACCTTAGTGGGCCGGCAGC-GGCG-CCTGGGTAGAAGTCCCGGGTGC-AAGCTGGCAGAT 7733 Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCA 272 ||||||||||| || | ||||||||||||||||| Sbjct 7734 TGCAATTTCACTATACATGGGGATAAATCCTTTGCA 7769 >seq13 Length=17595 Score = 253 bits (280), Expect = 3e-65 Identities = 230/284 (81%), Gaps = 12/284 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||| | Sbjct 17053 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCATT 17110 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 17111 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 17170 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||| | | |||| || || |||| |||||| |||||||||||||||||||||| || || Sbjct 17171 GAAAGCGATGATACT-ACCCGCACGTCGTAGACGGATACGAATAGGCTTCGGCCACGCAC 17229 Query 181 CTTAGCAGGCCGGCAACGGGCGT-CCCGCGGAAGC----GCGGGGCGCTCAGCTGGCGGA 235 | | ||||||| ||||| | | | |||||||| |||||| | || |||||| Sbjct 17230 CCCAACAGGCCGACAACGCCCCTGTCTGCGGAAGCGCAGGCGGGGTGGTC----GGCGGA 17285 Query 236 TTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGACC 279 ||| ||||| || | || |||| | ||| |||| |||||| Sbjct 17286 TTGTCATTTCGCCGCGGGCGGGGACGGAACCTCTGCATACGACC 17329 >seq365 Length=35519 Score = 242 bits (268), Expect = 6e-62 Identities = 224/275 (81%), Gaps = 9/275 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| |||||||||| || |||||| ||||||||||||| ||||||| |||||||||| Sbjct 33749 GTACAAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGTGGCTGTCCAACCAGGCAGT 33806 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 33807 ACTGCAAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATG--G 33864 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 | | | || |||| | || ||||| ||| |||||||||| ||||| || ||||| | Sbjct 33865 GGATGTGGCAATTCCCCCCCACACATTGTACTCGGATACGAGTAGGCCTCCAGGCCCTGG 33924 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCG-CGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 |||||||| |||||||| | ||| || | ||||| | ||||| ||| ||| |||| Sbjct 33925 ACCTTAGCGGGCCGGCAGC-GGCACCCAGATGGAAGTCCCAGGCGC-GAGCCGGCAGATT 33982 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCA 272 ||||||||||||| | ||||||||||||||||| Sbjct 33983 GCAATTTCACCATACATGGGGATAAATCCTTTGCA 34017 >seq3891 Length=20417 Score = 233 bits (258), Expect = 3e-59 Identities = 225/281 (80%), Gaps = 7/281 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| |||||||||| || |||||| |||||| |||||||| ||||||||| |||||| Sbjct 18364 GTACAAGAGGAACCGTTGA-TTCAGA-TAATTGATTTTTGCGACTGTCTGACTGGGCAGT 18421 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 18422 GCCGTAAAGCTACCACCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTG 18481 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTC--GGCCCCGA 178 | || | |||| | | | |||| |||||| |||| || |||| || ||||| | Sbjct 18482 GGACATGACAATTCCCCACCGTACATTGTAGTCAGATATCAACAGGCCTCCGGGCCCTGG 18541 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCC-CGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 ||||||| ||||||| | |||| || | ||||| | || ||| |||| || |||| Sbjct 18542 ACCTTAGTGGGCCGGC-AGTGGCGCCCGGGTGGAAGTCCTGGACGC-CAGCCTGCAGATT 18599 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||||||||| ||| ||||||||||||||||| || || Sbjct 18600 GCAATTTCACCATACGCGGGGATAAATCCTTTGCACACAAC 18640 >seq1215 Length=717 Score = 233 bits (258), Expect = 3e-59 Identities = 226/284 (80%), Gaps = 11/284 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||| | Sbjct 617 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCATT 560 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct 559 GCCGCGAAGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCA 500 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||| | | || | | || |||| ||||||||||||||||||||||||||||| | || Sbjct 499 GAAGGCGATGTTCTTGCCCCGCACGTCGTAGTCGGATACGAATAGGCTTCGGCCAGGCAC 440 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAG----CGCGGGGCGCTCAGCTGGCGGAT 236 | | |||| || || || | | | ||||| ||||||| || | | ||||| Sbjct 439 CCCAACAGGTCGACACCGCCCCGCTTGTGGAAGCACTCGCGGGG---TC-GTCGACGGAT 384 Query 237 TGCAATTTCACCATGCGCAGGGA-TAAATCCTTTGCAGACGACC 279 | ||||| | | | || |||| | | ||| ||||||||||| Sbjct 383 AGTCATTTCGCAACGGGCGGGGAGTTGAACCTCTGCAGACGACC 340 >seq1248 Length=1159 Score = 223 bits (246), Expect = 6e-56 Identities = 167/191 (87%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||| Sbjct 625 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 682 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct 683 GCCGCGACGCTACCATCTGCCAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTGCCG 742 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC-GGCCCCGA 178 ||| | ||||||| ||||| || | ||||||| ||||||||||||| |||| || | || Sbjct 743 GAAAGCGGTGATTTTCTCCCGCCCGTCGTAGTTGGATACGAATAGGCCTTCGGGTCATGA 802 Query 179 ACCTTAGCAGG 189 |||| |||||| Sbjct 803 ACCTCAGCAGG 813 >seq512 Length=696 Score = 223 bits (246), Expect = 6e-56 Identities = 172/199 (86%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||| | Sbjct 218 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCATT 275 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 276 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 335 Query 121 GAACGGGGTGATTCTCTC-CTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179 ||||| | | ||| | || | |||| ||||||||||||||||||||||||||||| | | Sbjct 336 GAACGCGAT-ATTATTTCTCCGCACGTCGTAGTCGGATACGAATAGGCTTCGGCCAGGCA 394 Query 180 CCTTAGCAGGCCGGCAACG 198 || | |||| || || || Sbjct 395 CCCCAACAGGTCGACACCG 413 >seq3851 Length=2819 Score = 221 bits (244), Expect = 2e-55 Identities = 175/204 (86%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 997 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 940 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 939 GCCGCGACGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAACCCATACCG 880 Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTC--GGCCCC 176 ||| | | ||| || | ||| || | ||||||||||||||||||||| | || |||| | Sbjct 879 GAAGGCGATGATTTGTTTCCCGCGCGTCGTAGTCGGATACGAATAGGCCCTCGTGGCCAC 820 Query 177 GAACCTTAGCAGGCCGGCAACGGG 200 | |||| | |||| || ||||||| Sbjct 819 GGACCTCAACAGGTCGACAACGGG 796 >seq1121 Length=10576 Score = 219 bits (242), Expect = 7e-55 Identities = 160/182 (88%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||| ||||||||||||||||||||||||||| ||||| | Sbjct 2659 GTACGAGAGGAACCGCTGA-TTCA-AATAATTGGTTTTTGCGGCTGTCTGACAAGGCATT 2716 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| Sbjct 2717 GCCGCGAAGCTACCATTTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 2776 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||| | ||| | ||| |||| ||||||||||||||||||||||||||||| | || Sbjct 2777 GAAATTGACGAT--TATCCCGCACGTCGTAGTCGGATACGAATAGGCTTCGGCCATGCAC 2834 Query 181 CT 182 || Sbjct 2835 CT 2836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819169121024