Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09]
449 sequences; 39,397,682 total letters
Query= AAMG01001182.1
Length=261
Score E
Sequences producing significant alignments: (Bits) Value
seq74 87.8 3e-15
>seq74
Length=146672
Score = 87.8 bits (96), Expect = 3e-15
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 49 TCGTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAG 108
||||||||| |||| || |||| || ||||| ||||||||||| || || || | |
Sbjct 1510 TCGTCCAGGTCCGGGGCGGGCGACTCCTCCAGCACCTTCTGGTGCCGCCGCTGGACGCTG 1569
Query 109 CAATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCC 168
|| ||||| ||||||||| || || || ||| |||| ||||| | || ||||| ||
Sbjct 1570 CAGTCGCGCTCGCCCAGGGCGACGGTGTTGCCGTGGCGGTCGGCAAAGACCTGCACCTCG 1629
Query 169 ACGTGACGTGG 179
||||| || ||
Sbjct 1630 ACGTGCCGCGG 1640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 735996798630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |