Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09]
449 sequences; 39,397,682 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq266 154 2e-35
seq198 154 2e-35
seq137 154 2e-35
seq136 154 2e-35
seq80 140 4e-31
seq135 111 2e-22
seq397 100 3e-19
seq147 100 3e-19
>seq266
Length=5848
Score = 154 bits (170), Expect = 2e-35
Identities = 153/193 (79%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 5137 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 5078
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG-C 124
|| || |||||| | || |||||||||||| |||| ||||||||||| ||||| ||| |
Sbjct 5077 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCT-GTTCCCCCGCC 5019
Query 125 ACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGC 182
||| ||| |||| ||||| || ||| || | ||| | || |||| | |||
Sbjct 5018 ACACCCAGTGAAGGGCATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 4959
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 4958 GGTGAGGCGGACC 4946
>seq198
Length=9641
Score = 154 bits (170), Expect = 2e-35
Identities = 151/192 (79%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 6969 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 6910
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| | || |||||||||||| |||| |||||||||||| |||| | ||
Sbjct 6909 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGCCA 6850
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| |||| ||||| || ||| || | ||| | || |||| | |||
Sbjct 6849 CACCCAGTGAAGGGCATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTGCACGCG 6790
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 6789 GTGAGGCGGACC 6778
Score = 120 bits (132), Expect = 4e-25
Identities = 86/99 (87%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 697 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 638
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGT 104
|| || |||||| | || |||||||||||| |||| ||
Sbjct 637 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGT 599
>seq137
Length=18433
Score = 154 bits (170), Expect = 2e-35
Identities = 151/192 (79%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 175 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 234
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| | || |||||||||||| |||| |||||||||||| |||| | ||
Sbjct 235 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGCCA 294
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| |||| ||||| || ||| || | ||| | || |||| | |||
Sbjct 295 CACCCAGTGAAGGGCATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTGCACGCG 354
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 355 GTGAGGCGGACC 366
Score = 150 bits (166), Expect = 2e-34
Identities = 114/133 (86%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 4954 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 5013
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| | || |||||||||||| |||| |||||||||||| |||| | ||
Sbjct 5014 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGCCA 5073
Query 126 CA-CCAATGAAGG 137
|| ||| ||||||
Sbjct 5074 CACCCAGTGAAGG 5086
Score = 127 bits (140), Expect = 2e-27
Identities = 90/103 (87%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 16485 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 16544
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAA 108
|| || |||||| | || |||||||||||| |||| ||||||
Sbjct 16545 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAA 16587
Score = 118 bits (130), Expect = 1e-24
Identities = 91/107 (85%), Gaps = 1/107 (1%)
Strand=Plus/Plus
Query 32 CGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTA 91
||||||||| ||||||||||||||||||||||| || || |||||| | || |||||||
Sbjct 8492 CGTCCTATTTCATTATTCCATGCTAATGTATTCGAGCATAGGCCTGCCTGGAGCACTCTA 8551
Query 92 ATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACA-CCAATGAAGG 137
||||| |||| |||||||||||| |||| | |||| ||| ||||||
Sbjct 8552 ATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGCCACACCCAGTGAAGG 8598
Score = 102 bits (112), Expect = 1e-19
Identities = 71/81 (88%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 28 CGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACAC 87
||||||||||||| ||||||||||||||||||||||| || || |||||| | || |||
Sbjct 11512 CGCACGTCCTATTTCATTATTCCATGCTAATGTATTCGAGCATAGGCCTGCCTGGAGCAC 11571
Query 88 TCTAATTTTCTCAAGGTAAAA 108
||||||||| |||| ||||||
Sbjct 11572 TCTAATTTTTTCAAAGTAAAA 11592
>seq136
Length=18941
Score = 154 bits (170), Expect = 2e-35
Identities = 151/192 (79%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 622 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 681
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| | || |||||||||||| |||| |||||||||||| |||| | ||
Sbjct 682 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGCCA 741
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| |||| ||||| || ||| || | ||| | || |||| | |||
Sbjct 742 CACCCAGTGAAGGGCATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTGCACGCG 801
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 802 GTGAGGCGGACC 813
Score = 105 bits (116), Expect = 8e-21
Identities = 75/86 (87%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 14320 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 14379
Query 66 GGCGTAAGCCTGCTTTGAACACTCTA 91
|| || |||||| | || |||||||
Sbjct 14380 AGCATAGGCCTGCCTGGAGCACTCTA 14405
>seq80
Length=128910
Score = 140 bits (154), Expect = 4e-31
Identities = 98/112 (88%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 8583 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 8642
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTT 117
|| || |||||| | || |||||||||||| |||| |||||||||||| ||
Sbjct 8643 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTT 8694
>seq135
Length=19661
Score = 111 bits (122), Expect = 2e-22
Identities = 119/155 (77%), Gaps = 2/155 (1%)
Strand=Plus/Plus
Query 43 ATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAG 102
||||||||||||||||||||||| || || |||||| | || |||||||||||| ||||
Sbjct 1628 ATTATTCCATGCTAATGTATTCGAGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAA 1687
Query 103 GTAAAAGTCCTGGTTCCTCCGCACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAG 160
|||||||||||| |||| | |||| ||| |||| ||||| || ||| || | ||
Sbjct 1688 GTAAAAGTCCTGTTTCCCCGCCACACCCAGTGAAGGGCATGGGGTTCCACAGAGGGAAAG 1747
Query 161 GGCTGGGTAATGCAGTACTCGCCGTGAGGCGGACC 195
| | || |||| | ||| ||||||||||||
Sbjct 1748 GCCCGGCCGGACCAGTGCACGCGGTGAGGCGGACC 1782
>seq397
Length=2477
Score = 100 bits (110), Expect = 3e-19
Identities = 72/83 (87%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 616 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 675
Query 66 GGCGTAAGCCTGCTTTGAACACT 88
|| || |||||| | || ||||
Sbjct 676 AGCATAGGCCTGCCTGGAGCACT 698
Score = 73.4 bits (80), Expect = 5e-11
Identities = 98/134 (73%), Gaps = 2/134 (1%)
Strand=Plus/Plus
Query 64 CGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123
|| || || |||||| | || |||||||||||| |||| |||||||||||| |||| |
Sbjct 913 CGAGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAAAGTCCTGTTTCCCCGC 972
Query 124 CACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCG 181
|||| ||| |||| ||||| || ||| || | ||| | || |||| | ||
Sbjct 973 CACACCCAGTGAAGGGCATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTGCACG 1032
Query 182 CCGTGAGGCGGACC 195
| ||||||||||||
Sbjct 1033 CGGTGAGGCGGACC 1046
>seq147
Length=16219
Score = 100 bits (110), Expect = 3e-19
Identities = 72/83 (87%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 15702 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCG 15643
Query 66 GGCGTAAGCCTGCTTTGAACACT 88
|| || |||||| | || ||||
Sbjct 15642 AGCATAGGCCTGCCTGGAGCACT 15620
Score = 84.2 bits (92), Expect = 3e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 4940 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTTCATTATTCCATGCTAATGTATTC 4882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595197411066
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