Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09]
449 sequences; 39,397,682 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq137 232 1e-58
seq136 228 1e-57
seq402 196 8e-48
seq345 196 8e-48
seq198 196 8e-48
seq147 196 8e-48
seq393 179 6e-43
seq397 168 1e-39
seq80 140 5e-31
seq383 127 3e-27
>seq137
Length=18433
Score = 232 bits (256), Expect = 1e-58
Identities = 223/278 (80%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 6137 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 6080
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 6079 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 6020
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| || ||| | | || |||| | || ||| | ||||||||| |||| |
Sbjct 6019 GAACGCGGCGATAC-CGCCCGCACGT-ACAGATGGACAAGAATAGGCTCCGGCTTAGCGT 5962
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
|||||||||| | ||| | | ||||||||| ||| | | ||| |||| |
Sbjct 5961 CTTAGCAGGCGATCTGTCCGCGGCGC-AGGAAGCGCGCCGCGGT-GTTTCGCGTATTGTA 5904
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||| || | || ||| ||||||||||||||||||
Sbjct 5903 ATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 5866
Score = 122 bits (134), Expect = 1e-25
Identities = 150/200 (75%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 79 GCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTC 138
||||||| ||||||||||||||||||||||||||||||||||||||| || ||| | | |
Sbjct 1079 GCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGCGATAC-CGC 1021
Query 139 CTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACG 198
| |||| | || ||| | ||||||||| |||| | |||||||||| |
Sbjct 1020 CCGCACGT-ACAGATGGACAAGAATAGGCTCCGGCTTAGCGTCTTAGCAGGCGATCTGTC 962
Query 199 GGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGG 258
||| | | ||||||||| ||| | | ||| |||| ||||||| || | || |||
Sbjct 961 CGCGGCGC-AGGAAGCGCGCCGCGGT-GTTTCGCGTATTGTAATTTCAACACGAGCGGGG 904
Query 259 ATAAATCCTTTGCAGACGAC 278
||||||||||||||||||
Sbjct 903 TCAAATCCTTTGCAGACGAC 884
Score = 95.1 bits (104), Expect = 2e-17
Identities = 64/69 (93%), Gaps = 2/69 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 9287 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 9230
Query 61 GCCGCGAAG 69
|||||||||
Sbjct 9229 GCCGCGAAG 9221
>seq136
Length=18941
Score = 228 bits (252), Expect = 1e-57
Identities = 222/278 (80%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 3529 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 3472
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 3471 GCCGCGAAGCTACCATCTGCTGGTTAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 3412
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| || ||| | | || |||| | || ||| | ||||||||| |||| |
Sbjct 3411 GAACGCGGCGATAC-CGCCCGCACGT-ACAGATGGACAAGAATAGGCTCCGGCTTAGCGT 3354
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
|||||||||| | ||| | | ||||||||| ||| | | ||| |||| |
Sbjct 3353 CTTAGCAGGCGATCTGTCCGCGGCGC-AGGAAGCGCGCCGCGGT-GTTTCGCGTATTGTA 3296
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||| || | || ||| ||||||||||||||||||
Sbjct 3295 ATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 3258
>seq402
Length=2405
Score = 196 bits (216), Expect = 8e-48
Identities = 124/132 (94%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 1876 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1933
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1934 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1993
Query 121 GAACGGGGTGAT 132
||||| || |||
Sbjct 1994 GAACGCGGCGAT 2005
>seq345
Length=3479
Score = 196 bits (216), Expect = 8e-48
Identities = 124/132 (94%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 1338 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1395
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1396 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1455
Query 121 GAACGGGGTGAT 132
||||| || |||
Sbjct 1456 GAACGCGGCGAT 1467
>seq198
Length=9641
Score = 196 bits (216), Expect = 8e-48
Identities = 124/132 (94%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 2695 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 2752
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2753 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 2812
Query 121 GAACGGGGTGAT 132
||||| || |||
Sbjct 2813 GAACGCGGCGAT 2824
Score = 190 bits (210), Expect = 3e-46
Identities = 123/132 (93%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| | || ||||||
Sbjct 2549 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGCCCGGGCAGT 2606
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2607 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 2666
Query 121 GAACGGGGTGAT 132
||||| || |||
Sbjct 2667 GAACGCGGCGAT 2678
>seq147
Length=16219
Score = 196 bits (216), Expect = 8e-48
Identities = 124/132 (94%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 518 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 575
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 576 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 635
Query 121 GAACGGGGTGAT 132
||||| || |||
Sbjct 636 GAACGCGGCGAT 647
>seq393
Length=2569
Score = 179 bits (198), Expect = 6e-43
Identities = 130/148 (88%), Gaps = 2/148 (1%)
Strand=Plus/Minus
Query 26 AATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGAT 85
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 1553 AATAATTGGTTTTTGCGGCTGTCCGACCGGGCAGTGCCGCGAAGCTACCATCTGCTGGAT 1494
Query 86 TATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACA 145
||||||||||||||||||||||||||||||||||||||| || ||| | | || ||||
Sbjct 1493 AATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGCGATAC-CGCCCGCACG 1435
Query 146 TCGTAGTCGGATACGAATAGGCTTCGGC 173
| || ||| | ||||||||| ||||
Sbjct 1434 T-ACAGATGGACAAGAATAGGCTCCGGC 1408
>seq397
Length=2477
Score = 168 bits (186), Expect = 1e-39
Identities = 178/229 (78%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 50 GACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAG 109
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 492 GACCGGGCAGTGCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAG 433
Query 110 AATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTT 169
|||||||||||||||| || ||| | | || |||| | || ||| | |||||||||
Sbjct 432 AATCCATGCCAGAACGCGGCGATAC-CGCCCGCACGT-ACAGATGGACAAGAATAGGCTC 375
Query 170 CGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCT 229
|||| | |||||||||| | ||| | | ||||||||| ||| | |
Sbjct 374 CGGCTTAGCGTCTTAGCAGGCGATCTGTCCGCGGCGC-AGGAAGCGCGCCGCGGT-GTTT 317
Query 230 GGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||| |||| ||||||| || | || ||| ||||||||||||||||||
Sbjct 316 CGCGTATTGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 268
>seq80
Length=128910
Score = 140 bits (154), Expect = 5e-31
Identities = 114/136 (84%), Gaps = 2/136 (1%)
Strand=Plus/Minus
Query 55 GGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 6037 GGCAGTGCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCC 5978
Query 115 ATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCC 174
||||||||||| || || || | || |||| | || ||| | ||||||||| ||||
Sbjct 5977 ATGCCAGAACGCGGCGA-TCCCGCCCGCACGT-ACAGATGGACAAGAATAGGCTCCGGCT 5920
Query 175 CCGAACCTTAGCAGGC 190
| ||||||||||
Sbjct 5919 TAGCGTCTTAGCAGGC 5904
Score = 138 bits (152), Expect = 2e-30
Identities = 159/209 (76%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 70 CTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGT 129
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1423 CTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGC 1364
Query 130 GATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGG 189
||| | | || |||| | || ||| | ||||||||| |||| | |||||||||
Sbjct 1363 GATAC-CGCCCGCACGT-ACAGATGGACAAGAATAGGCTCCGGCTTAGCGTCTTAGCAGG 1306
Query 190 CCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCA 249
| | ||| | | ||||||||| ||| | | ||| |||| ||||||| ||
Sbjct 1305 CGATCTGTCCGCGGCGC-AGGAAGCGCGCCGCGGT-GTTTCGCGTATTGTAATTTCAACA 1248
Query 250 TGCGCAGGGATAAATCCTTTGCAGACGAC 278
| || ||| ||||||||||||||||||
Sbjct 1247 CGAGCGGGGTCAAATCCTTTGCAGACGAC 1219
Score = 105 bits (116), Expect = 1e-20
Identities = 140/189 (74%), Gaps = 4/189 (2%)
Strand=Plus/Minus
Query 90 GCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGT 149
|||||||||||||||||||||||||||||||||||| || ||| | | || |||| |
Sbjct 11770 GCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGCGATAC-CGCCCGCACGT-AC 11713
Query 150 AGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGCG 209
|| ||| | ||||||||| |||| | |||||||||| | ||| | | |
Sbjct 11712 AGATGGACAAGAATAGGCTCCGGCTTAGCGTCTTAGCAGGCGATCTGTCCGCGGCGC-AG 11654
Query 210 GAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTT 269
|||||||| ||| | | ||| |||| ||||||| || | || ||| |||||||||
Sbjct 11653 GAAGCGCGCCGCGGT-GTTTCGCGTATTGTAATTTCAACACGAGCGGGGTCAAATCCTTT 11595
Query 270 GCAGACGAC 278
|||||||||
Sbjct 11594 GCAGACGAC 11586
>seq383
Length=2678
Score = 127 bits (140), Expect = 3e-27
Identities = 83/89 (93%), Gaps = 2/89 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 1473 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1530
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATG 89
||||||||||||||||||||||||| |||
Sbjct 1531 GCCGCGAAGCTACCATCTGCTGGATAATG 1559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819196436736
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