Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09] 449 sequences; 39,397,682 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq137 232 1e-58 seq136 228 1e-57 seq402 196 8e-48 seq345 196 8e-48 seq198 196 8e-48 seq147 196 8e-48 seq393 179 6e-43 seq397 168 1e-39 seq80 140 5e-31 seq383 127 3e-27 >seq137 Length=18433 Score = 232 bits (256), Expect = 1e-58 Identities = 223/278 (80%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 6137 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 6080 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 6079 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 6020 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| || ||| | | || |||| | || ||| | ||||||||| |||| | Sbjct 6019 GAACGCGGCGATAC-CGCCCGCACGT-ACAGATGGACAAGAATAGGCTCCGGCTTAGCGT 5962 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240 |||||||||| | ||| | | ||||||||| ||| | | ||| |||| | Sbjct 5961 CTTAGCAGGCGATCTGTCCGCGGCGC-AGGAAGCGCGCCGCGGT-GTTTCGCGTATTGTA 5904 Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| || | || ||| |||||||||||||||||| Sbjct 5903 ATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 5866 Score = 122 bits (134), Expect = 1e-25 Identities = 150/200 (75%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 79 GCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTC 138 ||||||| ||||||||||||||||||||||||||||||||||||||| || ||| | | | Sbjct 1079 GCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGCGATAC-CGC 1021 Query 139 CTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACG 198 | |||| | || ||| | ||||||||| |||| | |||||||||| | Sbjct 1020 CCGCACGT-ACAGATGGACAAGAATAGGCTCCGGCTTAGCGTCTTAGCAGGCGATCTGTC 962 Query 199 GGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGG 258 ||| | | ||||||||| ||| | | ||| |||| ||||||| || | || ||| Sbjct 961 CGCGGCGC-AGGAAGCGCGCCGCGGT-GTTTCGCGTATTGTAATTTCAACACGAGCGGGG 904 Query 259 ATAAATCCTTTGCAGACGAC 278 |||||||||||||||||| Sbjct 903 TCAAATCCTTTGCAGACGAC 884 Score = 95.1 bits (104), Expect = 2e-17 Identities = 64/69 (93%), Gaps = 2/69 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 9287 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 9230 Query 61 GCCGCGAAG 69 ||||||||| Sbjct 9229 GCCGCGAAG 9221 >seq136 Length=18941 Score = 228 bits (252), Expect = 1e-57 Identities = 222/278 (80%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 3529 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 3472 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 3471 GCCGCGAAGCTACCATCTGCTGGTTAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 3412 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| || ||| | | || |||| | || ||| | ||||||||| |||| | Sbjct 3411 GAACGCGGCGATAC-CGCCCGCACGT-ACAGATGGACAAGAATAGGCTCCGGCTTAGCGT 3354 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240 |||||||||| | ||| | | ||||||||| ||| | | ||| |||| | Sbjct 3353 CTTAGCAGGCGATCTGTCCGCGGCGC-AGGAAGCGCGCCGCGGT-GTTTCGCGTATTGTA 3296 Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| || | || ||| |||||||||||||||||| Sbjct 3295 ATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 3258 >seq402 Length=2405 Score = 196 bits (216), Expect = 8e-48 Identities = 124/132 (94%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 1876 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1933 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1934 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1993 Query 121 GAACGGGGTGAT 132 ||||| || ||| Sbjct 1994 GAACGCGGCGAT 2005 >seq345 Length=3479 Score = 196 bits (216), Expect = 8e-48 Identities = 124/132 (94%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 1338 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1395 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1396 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1455 Query 121 GAACGGGGTGAT 132 ||||| || ||| Sbjct 1456 GAACGCGGCGAT 1467 >seq198 Length=9641 Score = 196 bits (216), Expect = 8e-48 Identities = 124/132 (94%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 2695 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 2752 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2753 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 2812 Query 121 GAACGGGGTGAT 132 ||||| || ||| Sbjct 2813 GAACGCGGCGAT 2824 Score = 190 bits (210), Expect = 3e-46 Identities = 123/132 (93%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| | || |||||| Sbjct 2549 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGCCCGGGCAGT 2606 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2607 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 2666 Query 121 GAACGGGGTGAT 132 ||||| || ||| Sbjct 2667 GAACGCGGCGAT 2678 >seq147 Length=16219 Score = 196 bits (216), Expect = 8e-48 Identities = 124/132 (94%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 518 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 575 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 576 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 635 Query 121 GAACGGGGTGAT 132 ||||| || ||| Sbjct 636 GAACGCGGCGAT 647 >seq393 Length=2569 Score = 179 bits (198), Expect = 6e-43 Identities = 130/148 (88%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 26 AATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGAT 85 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct 1553 AATAATTGGTTTTTGCGGCTGTCCGACCGGGCAGTGCCGCGAAGCTACCATCTGCTGGAT 1494 Query 86 TATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACA 145 ||||||||||||||||||||||||||||||||||||||| || ||| | | || |||| Sbjct 1493 AATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGCGATAC-CGCCCGCACG 1435 Query 146 TCGTAGTCGGATACGAATAGGCTTCGGC 173 | || ||| | ||||||||| |||| Sbjct 1434 T-ACAGATGGACAAGAATAGGCTCCGGC 1408 >seq397 Length=2477 Score = 168 bits (186), Expect = 1e-39 Identities = 178/229 (78%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 50 GACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAG 109 |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 492 GACCGGGCAGTGCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAG 433 Query 110 AATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTT 169 |||||||||||||||| || ||| | | || |||| | || ||| | ||||||||| Sbjct 432 AATCCATGCCAGAACGCGGCGATAC-CGCCCGCACGT-ACAGATGGACAAGAATAGGCTC 375 Query 170 CGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCT 229 |||| | |||||||||| | ||| | | ||||||||| ||| | | Sbjct 374 CGGCTTAGCGTCTTAGCAGGCGATCTGTCCGCGGCGC-AGGAAGCGCGCCGCGGT-GTTT 317 Query 230 GGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| |||| ||||||| || | || ||| |||||||||||||||||| Sbjct 316 CGCGTATTGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 268 >seq80 Length=128910 Score = 140 bits (154), Expect = 5e-31 Identities = 114/136 (84%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 55 GGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 6037 GGCAGTGCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCC 5978 Query 115 ATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCC 174 ||||||||||| || || || | || |||| | || ||| | ||||||||| |||| Sbjct 5977 ATGCCAGAACGCGGCGA-TCCCGCCCGCACGT-ACAGATGGACAAGAATAGGCTCCGGCT 5920 Query 175 CCGAACCTTAGCAGGC 190 | |||||||||| Sbjct 5919 TAGCGTCTTAGCAGGC 5904 Score = 138 bits (152), Expect = 2e-30 Identities = 159/209 (76%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 70 CTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGT 129 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct 1423 CTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGC 1364 Query 130 GATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGG 189 ||| | | || |||| | || ||| | ||||||||| |||| | ||||||||| Sbjct 1363 GATAC-CGCCCGCACGT-ACAGATGGACAAGAATAGGCTCCGGCTTAGCGTCTTAGCAGG 1306 Query 190 CCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCA 249 | | ||| | | ||||||||| ||| | | ||| |||| ||||||| || Sbjct 1305 CGATCTGTCCGCGGCGC-AGGAAGCGCGCCGCGGT-GTTTCGCGTATTGTAATTTCAACA 1248 Query 250 TGCGCAGGGATAAATCCTTTGCAGACGAC 278 | || ||| |||||||||||||||||| Sbjct 1247 CGAGCGGGGTCAAATCCTTTGCAGACGAC 1219 Score = 105 bits (116), Expect = 1e-20 Identities = 140/189 (74%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 90 GCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACATCGT 149 |||||||||||||||||||||||||||||||||||| || ||| | | || |||| | Sbjct 11770 GCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGCGATAC-CGCCCGCACGT-AC 11713 Query 150 AGTCGGATACGAATAGGCTTCGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCCCGCG 209 || ||| | ||||||||| |||| | |||||||||| | ||| | | | Sbjct 11712 AGATGGACAAGAATAGGCTCCGGCTTAGCGTCTTAGCAGGCGATCTGTCCGCGGCGC-AG 11654 Query 210 GAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTT 269 |||||||| ||| | | ||| |||| ||||||| || | || ||| ||||||||| Sbjct 11653 GAAGCGCGCCGCGGT-GTTTCGCGTATTGTAATTTCAACACGAGCGGGGTCAAATCCTTT 11595 Query 270 GCAGACGAC 278 ||||||||| Sbjct 11594 GCAGACGAC 11586 >seq383 Length=2678 Score = 127 bits (140), Expect = 3e-27 Identities = 83/89 (93%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 1473 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1530 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATG 89 ||||||||||||||||||||||||| ||| Sbjct 1531 GCCGCGAAGCTACCATCTGCTGGATAATG 1559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819196436736