Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000687475.1_202014-05-09] 449 sequences; 39,397,682 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq48 95.1 5e-14 >seq48 Length=244570 Score = 95.1 bits (104), Expect = 5e-14 Identities = 110/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||| || || ||||||| | | ||||||||||||||||| ||| | || | Sbjct 120229 CAATTGTCATTCGCGACGGAATGGCGTGCGGGTTGATGATGATGTCTGGCGTGACCCCTT 120288 Query 364485 CAGCGGTAAAGGGCATAT-CTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 | ||||||||||| | || | | || ||| | | |||||| || |||||||| | Sbjct 120289 CCCGTGTAAAGGGCATGTCCTCCTGCCGGTACG-TCACACCAATCGTGCCCTTTTGTCCG 120347 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||| ||||||||||||||||| Sbjct 120348 TGACGAGACGCAAACTTGTCGCCAAT 120373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884875556601957