Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29] 139 sequences; 33,567,624 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq14 473 2e-131 seq24 259 9e-67 >seq14 Length=615434 Score = 473 bits (524), Expect = 2e-131 Identities = 294/314 (94%), Gaps = 1/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||| ||| || |||||||||||||||||||| |||||| Sbjct 8739 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGTGTGGCGGGGA 8680 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||||||||||||||||||| || | |||||||| ||||||||||||| Sbjct 8679 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 8620 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 8619 TAGCATGGAATAATGAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 8560 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 8559 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 8500 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 8499 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 8441 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 8440 ACGAAAGTTAGGGG 8427 Score = 473 bits (524), Expect = 2e-131 Identities = 294/314 (94%), Gaps = 1/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||| ||| || |||||||||||||||||||| |||||| Sbjct 17329 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGTGTGGCGGGGA 17270 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||||||||||||||||||| || | |||||||| ||||||||||||| Sbjct 17269 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 17210 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 17209 TAGCATGGAATAATGAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 17150 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 17149 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 17090 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 17089 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 17031 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 17030 ACGAAAGTTAGGGG 17017 Score = 208 bits (230), Expect = 1e-51 Identities = 135/148 (91%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||| ||| || |||||||||||||||||||| |||||| Sbjct 148 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCCCTTCACTGGGTGTGGCGGGGA 89 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||||||||||||||||||| || | |||||||| ||||||||||||| Sbjct 88 AACAGGACTTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 29 Query 125 TAGCATGGAATAATAGAATAGGACGTGC 152 |||||||||||||| |||||||||||| Sbjct 28 TAGCATGGAATAATGAAATAGGACGTGC 1 >seq24 Length=427720 Score = 259 bits (286), Expect = 9e-67 Identities = 247/315 (78%), Gaps = 1/315 (0%) Strand=Plus/Plus Query 4 TTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG 63 || ||||||| ||||||||||||| || || || ||||| ||| ||| | ||||| Sbjct 357025 TTAGTCCGGCTAGGCCTTTCCTTCTATAGAACCCTATACCCTTTACTAGGTATAGCGGGG 357084 Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123 | | |||||||||||| ||||||||||||| || | | |||| | | || |||| | Sbjct 357085 AAATAAGACTTTTACTTTAAAAAAATTAGAGTACTCTAGGTAGGCTTATACTTAAATATA 357144 Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183 |||| || |||||||| |||| || | |||||||||| || |||| ||||||||| Sbjct 357145 TTAGTATAGAATAATAAAATAAGATATATAGTTCTATTTTATTAGTTTTTAGGACCGCTA 357204 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||| ||||||||||||| ||||||| | |||||| |||| | ||| || |||||||| Sbjct 357205 TAATAATTAATAGGGATAATCGGGGGCATTAGTATTTAATTATTAGAAGTAAAATTCTTA 357264 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 |||||||| |||||||| |||||||||||| || | |||||| |||| |||||| || | Sbjct 357265 GATTTATTAAAGACTAATTACTGCGAAAGCATTTGCTAAGGATATTTTTATTAATTAG-G 357323 Query 304 AACGAAAGTTAGGGG 318 || ||||||||||| Sbjct 357324 AATAAAAGTTAGGGG 357338 Score = 100 bits (110), Expect = 5e-19 Identities = 65/70 (93%), Gaps = 1/70 (1%) Strand=Plus/Plus Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 ||||||||||||||||||||||||| || |||||||||||||||||||| || |||||| Sbjct 352823 ATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATTAG-GAACGA 352881 Query 309 AAGTTAGGGG 318 |||||||||| Sbjct 352882 AAGTTAGGGG 352891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198727872