Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq14 724 0.0
seq24 342 2e-91
>seq14
Length=615434
Score = 724 bits (802), Expect = 0.0
Identities = 466/505 (92%), Gaps = 3/505 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 305 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 364
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 365 CCCCGGATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 424
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 425 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 484
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 485 GGCCACTACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 544
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG-GAGCCCCGAAGGGCGTTGG 299
||||||| ||||||||| ||||||| |||| |||||||| |||||| | ||||| ||||
Sbjct 545 CAAGGCCCTGCGATTCGAGAAGTTATCATGATTCACCAAGAGAGCCCAG-AGGGCATTGG 603
Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359
||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 604 TTTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTA 663
Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419
||||||||||||||||||| |||| ||| |||||||||||||||||||||| || |||||
Sbjct 664 GAATTACCACGGTTATCCAAGTAGCAAGATACTATCAAATAAACGATAACTTATATAATG 723
Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479
|||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct 724 AGCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTT 782
Query 480 GAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||
Sbjct 783 GAGACAAGCATATGACTACTGGCAG 807
Score = 724 bits (802), Expect = 0.0
Identities = 466/505 (92%), Gaps = 3/505 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8896 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 8955
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 8956 CCCCGGATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 9015
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 9016 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 9075
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 9076 GGCCACTACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 9135
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG-GAGCCCCGAAGGGCGTTGG 299
||||||| ||||||||| ||||||| |||| |||||||| |||||| | ||||| ||||
Sbjct 9136 CAAGGCCCTGCGATTCGAGAAGTTATCATGATTCACCAAGAGAGCCCAG-AGGGCATTGG 9194
Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359
||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 9195 TTTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTA 9254
Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419
||||||||||||||||||| |||| ||| |||||||||||||||||||||| || |||||
Sbjct 9255 GAATTACCACGGTTATCCAAGTAGCAAGATACTATCAAATAAACGATAACTTATATAATG 9314
Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479
|||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct 9315 AGCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTT 9373
Query 480 GAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||
Sbjct 9374 GAGACAAGCATATGACTACTGGCAG 9398
Score = 724 bits (802), Expect = 0.0
Identities = 466/505 (92%), Gaps = 3/505 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17486 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 17545
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 17546 CCCCGGATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 17605
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 17606 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 17665
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 17666 GGCCACTACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 17725
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAG-GAGCCCCGAAGGGCGTTGG 299
||||||| ||||||||| ||||||| |||| |||||||| |||||| | ||||| ||||
Sbjct 17726 CAAGGCCCTGCGATTCGAGAAGTTATCATGATTCACCAAGAGAGCCCAG-AGGGCATTGG 17784
Query 300 TTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359
||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 17785 TTTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTA 17844
Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419
||||||||||||||||||| |||| ||| |||||||||||||||||||||| || |||||
Sbjct 17845 GAATTACCACGGTTATCCAAGTAGCAAGATACTATCAAATAAACGATAACTTATATAATG 17904
Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479
|||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct 17905 AGCCATTCGCAGTTTCGCCGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTT 17963
Query 480 GAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||
Sbjct 17964 GAGACAAGCATATGACTACTGGCAG 17988
>seq24
Length=427720
Score = 342 bits (378), Expect = 2e-91
Identities = 376/498 (76%), Gaps = 2/498 (0%)
Strand=Plus/Minus
Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||| |||| ||||| |||||| ||||||||| | ||| |||||||||| | ||||||||
Sbjct 356868 TACTTATTCTAATTATAAGACCTAAAAGAGCCTTATATTAGTATTTATTATTACTACCTC 356809
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
| ||||| |||||||| ||||| |||||||||| ||| | |||||||||
Sbjct 356808 TTTAGATTAGGATTAGGTAATTTATACGCCTATTGCCTTCCTTAGATATAATAGCCGTTT 356749
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|| ||||||| ||| | || | || ||| | ||||| || | || |
Sbjct 356748 CTTAGGCTCCTTCTTTAGGGTCAAGCCTTAACCCTTTATTACCTATTATAATTATATTTA 356689
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
|| |||||| | || |||||| |||||| |||||||| ||| ||| || |||||
Sbjct 356688 GCTACTATCTAAATATTAAAAGTTAATAGGGAAGAAATTTAAATAAACTATTGCCGGTAT 356629
Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301
|||||| | ||| |||||||||| | | || | ||||| |||| || |||
Sbjct 356628 AAGGCCTTATAATTTAAAAAGTTATTATAATTTACTAGAGAGCCTAAAAGGTA-TTAGTT 356570
Query 302 TTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGA 361
||| |||||||||||| | |||||| |||||||| ||||||| || |||||||| ||||
Sbjct 356569 TTTAATCTAATAAATATATCCCTTCTAAAGTCGGGATTTTTAGTATATATTAGCTTTAGA 356510
Query 362 ATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAG 421
||||| | ||||||| | ||||||| |||||| ||||||||||||||| || |||| ||
Sbjct 356509 ATTACTATGGTTATCTAAGTAGTAAAATACTATTAAATAAACGATAACTTATATAATAAG 356450
Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481
| ||| |||||||| || |||| |||||||||||||||| || || ||||||||||| |
Sbjct 356449 CTATTTGCAGTTTCGCTATATA-ATTGCTTATACTTAGATATATATAGCTTAATCTTTAA 356391
Query 482 GACAAGCATATGACTACT 499
|| |||||||| ||||||
Sbjct 356390 GATAAGCATATAACTACT 356373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510397900544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |