Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29]
139 sequences; 33,567,624 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1 365 4e-96
seq32 149 5e-31
>seq1
Length=1559860
Score = 365 bits (404), Expect = 4e-96
Identities = 1205/1845 (65%), Gaps = 74/1845 (4%)
Strand=Plus/Plus
Query 65123 TAGTACATGCCGGTCTTGAGGCC-AGCA--CGCCAAGCATAGAAATGCATCGATGATAAT 65179
||||||||||| |||||||| || ||| | || ||| || |||||||| | | ||
Sbjct 377608 TAGTACATGCCAGTCTTGAGACCCAGCTTCCACCCGGCAAAG---TGCATCGACG-TGAT 377663
Query 65180 TTTGC--ATAATTCGGCTCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAAC 65237
|||| || || || || || || || || | ||||| ||| ||||| |
Sbjct 377664 CTTGCCCATGGTTGGG-TCCTTCATGTGAATGTTGAGAGACTGGGACTGGTCGATAAAGG 377722
Query 65238 GACCACGATCTGCAGCCATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGT 65297
||| || || || ||||| | | | | |||| ||| || |||||||| |||||||
Sbjct 377723 CACCGCGGTCGGCGGCCATCTGCACCACATGACGCTGCGAAATTTCCCAGACCGTCTTGT 377782
Query 65298 ACAGGCGACGTACCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAA 65357
|||| |||||| ||||| | |||| ||||| || || ||||
Sbjct 377783 ACAGAGCCTTTACCTCGCCGGGAATGTTGGGGATGTTCTGGATCGAGCCGTTCTCGGCAA 377842
Query 65358 TAATGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAG 65416
| |||||||| ||| | |||||||||| ||||| |||| |||| |||| |||
Sbjct 377843 TGATGCGATTCTTCATGGCGTCTGACCACAGACCCATGTCGACGAGATCCTTGAG--AAG 377900
Query 65417 TGACGA-TTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGT 65475
| | |||| ||| ||||||||||| | ||| || || || || |||||||||||
Sbjct 377901 CCATGGGTTGACGACCTGGAACTCGCCCGCCAGGACGCGTCGCTGGTAAATGTTGGACGT 377960
Query 65476 GATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGG 65535
| ||| || ||| | || ||||||| ||||| || | || || || || ||||||||
Sbjct 377961 GTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGGACGCCGTGGGCATGGG 378020
Query 65536 AGCGACCAACAATGAGTTTCGCAATCCGT--TCATTTCAATGTTG--TGACGCAATTCGT 65591
|||| || || ||||| || | |||| || || || | ||| | |||
Sbjct 378021 CGCGAGCAGCAGCGAGTTGCGAATCCCGTGCTCCTTGATCTGCTCCTTGAGGGAAT---- 378076
Query 65592 CCCAGTTCCACA--TCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGT 65649
|||| | ||||| |||| || | || ||| |||||| || |||||| |
Sbjct 378077 CCCACTCCCACAAGTCGGA-------CGGCGTC-ACGTTCCACATGTCAAACTGCAGGAT 378128
Query 65650 TCCGATACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG 65709
|| | |||||| || || ||| | ||| |||||||||||||| || |
Sbjct 378129 GCCTTCAGAGGCCGGAGATCCCTTGAACGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTC 378188
Query 65710 -ACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCAC 65768
|| | | || || ||||| || |||||||| ||||| | || || || |
Sbjct 378189 CACCGACGCCGTCAAG-GCGGCGTGGTAGATGGTCTCAAAAATCTGCTTGTTCAGCTCGC 378247
Query 65769 GTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAA 65828
| ||||| ||| | ||||| | | | | || | |||||||| |||||||
Sbjct 378248 GAGCCTCGGGAGACTCAAAGGGCATGCGAAGCGCAAGGAAGGCGTCGGCCAAGCCTTGAA 378307
Query 65829 CTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGT 65888
| || | ||| ||||||||||| |||| ||| | || || | || |||||||
Sbjct 378308 CACCGACACCAATGGGACGATGCCGCATGTTGCTGTTGCGTGCTTCTTGGACGGGGTAGT 378367
Query 65889 AATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCG--CAA 65946
|||| ||||| || || | ||| || ||||| || | |||||| ||
Sbjct 378368 GGTTGACGTCGATGATCTTGTTGAGATTTCGGACAACCAC--GCGGGTGACGTCGTGCAG 378425
Query 65947 TTGTTCGAAATCAAAAT-GTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAA 66005
| || ||| || | | | | || || ||| ||||||| ||| |
Sbjct 378426 CTTTTGGAAGTCGTACTTGCCTTGGTCGT-----AGT--------CCACAAAGGCGGGCA 378472
Query 66006 GGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTT 66065
||||||| || || ||||||||||| || | |||||| || || | ||||||| ||| |
Sbjct 378473 GGGCAAGGGAGGCAAGGTTGCAGACGGCAACCTCGTCGGGGGCCGAGTACTCGATAATCT 378532
Query 66066 CGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGC 66125
||||||| || || || ||| ||||| ||||| |||| || || ||||| | ||||
Sbjct 378533 CGGTGCAGAGGTTGGAGCTGCGAATGGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGC 378592
Query 66126 ATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGT 66185
| ||||||||||| ||| | || |||| ||||| || | ||| | ||| | ||
Sbjct 378593 AATGATCCTTGTACAGCATAAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATCGAGT 378652
Query 66186 GCCAAAGA----GCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATG 66240
||| || | ||| | || || | | | ||| | |||| ||| ||||| |
Sbjct 378653 ACCACAGCTTCTGGGCGCGGATT----GT-CTTGCGGCCACGGCCTTCGCGCTCGTACTT 378707
Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300
||| || | || || || || | |||| || | || || | || ||
Sbjct 378708 TTCATACAAAGCCTCAAACTCGTCGCCGTAGCAGTCGGCGAGCCCAGGGCATTCGTTGGG 378767
Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360
||||| || | ||| || |||| || || ||||| ||| || || || || |||||
Sbjct 378768 GCACATGAGGGTCCAGTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGGATCCA 378827
Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420
|| || |||||| ||||| || || ||||| ||||||| || || | | ||
Sbjct 378828 CAGCGCAAGGAAGAGGTCGCGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTTCTGAGATC 378887
Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480
||||| ||||||| ||||| ||||| || ||||||||||||||||| | |||| ||
Sbjct 378888 AAGGAATTCAAAGACATCGGCGTGCCAGGGCTCCAGGTAGATGGCGAAGGCGCCCGGTCG 378947
Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540
||| ||| |||||||||||||| | || ||||||||||| |||| ||| || ||
Sbjct 378948 CTTGTTGCCGCCTTGGTCGACGTATCTGGCAGTGTTGTTGAAGACTCGCAGCATGGGAAC 379007
Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600
|| ||||| || |||| ||||||||| | ||| |||||| || || || |||
Sbjct 379008 GACGCCGTTCGAGGTGCCGTTGGTGCCGGCAATGTAGGATCCGGTAGCACGAATGCGGTG 379067
Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTC 66658
|| ||||| || ||||| |||||| | || || || || ||| || | | ||||
Sbjct 379068 GACGTTCAGGCCGATACCGCCGGCCATTTTAGAAATCATGGCGCAAGTCTTGAGAGTGTC 379127
Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718
| | ||||| || ||| ||| |||| ||| | |||| |||| || ||| ||
Sbjct 379128 --GTAGATGCCCTCGATGCTGTCTTCCTTCATGTCGACGAGGAAGCACGAGGAAAGCTGA 379185
Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778
| || ||| | || ||||||||| |||| ||||| || ||| | | | |||
Sbjct 379186 CACTGAGGCGTGCCCGCGTTGAAGAGGGTAGGTGAGGCGTGGGTGAAGAATTTACTGGAC 379245
Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838
||| ||||| || || | ||| |||||||| || || || |||| |||
Sbjct 379246 ATGAGGTTGTAGGTTTCCAGGACGCGCTCAATGTTGTCTCCCCAGATGCCGACAGCAACA 379305
Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTA 66894
||||| | | || ||||| |||||||| | |||| ||| | | || | ||
Sbjct 379306 CGCATGATCATGTGCTGAGGTCGTTCGACAATCTTGCCG-TCC---AGCTTCAGGAGATA 379361
Query 66895 GGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939
|| || ||||| ||||||| |||||||||| || ||||| ||
Sbjct 379362 CGATCGCTCCAGCGTCTTGAAACCAAAGTACTGATAGTTGAAGTC 379406
>seq32
Length=314566
Score = 149 bits (164), Expect = 5e-31
Identities = 236/334 (71%), Gaps = 7/334 (2%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||||| || ||||| |||||||| | || ||| | || ||
Sbjct 225873 ATATGGCAAATGTACAAGAAGGCTGAGGCTTCTTTCTGGACAGCCGAAGAGATAGACCTG 225814
Query 61147 TCCAAAGACATGAATGACTGGGAGCGT----TTATCGAGCGGTGAACAACATTTCATTAA 61202
||||| || || | |||||| | | | | ||| || |||| | ||||||||
Sbjct 225813 TCCAAGGATTTGCACGACTGGAATAATCGCCTGAACGA-CGATGAAAAGTATTTCATTTC 225755
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| | ||||| |||||||| || ||||| || |||||||| || || | | || ||
Sbjct 225754 TCACATCTTGGCATTCTTTGCTGCCTCGGATGGCATCGTCAACGAAAACCTGGTTGAGCG 225695
Query 61263 TTTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321
||| || | |||||||| || | || || |||||||||||||| |||||||| |
Sbjct 225694 GTTCA-GCGGCGAGGTGCAGGTTCCTGAAGCCCGTTGTTTCTACGGGTTCCAGATCATGA 225636
Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381
|||||||| |||| || |||| ||| | | | ||||| ||||| |||| ||||| |
Sbjct 225635 TGGAGAATATCCATTCCGAGACGTATTCTTTATTGATCGACACGTATATCAAGGAGCACG 225576
Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGAC 61415
|| | || | | ||||||||||| || ||
Sbjct 225575 CGCAGCGAAATTACCTCTTCAATGCCATTGAAAC 225542
Score = 120 bits (132), Expect = 2e-22
Identities = 297/446 (67%), Gaps = 5/446 (1%)
Strand=Plus/Minus
Query 61487 AACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAA 61546
|||||||| | || || || | |||||||| | || |||||||| | || || | |
Sbjct 225404 AACGATTGGTTGCCTTCGCCGCTGTCGAGGGCATCTTCTTCAGTGGTGCATTCGCGTCCA 225345
Query 61547 TCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATAT 61606
|||||||| | ||||| || || || |||||||| || |||||| || || | ||||
Sbjct 225344 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGGCTTACCTTCTCAAACGAACTCATAT 225285
Query 61607 CACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGA 61666
| || |||||||| |||| || ||||| |||| || | | |||| |
Sbjct 225284 CCCGTGACGAGGGTTTGCACACCGACTTTGCATGCCTGCTG--CACTCTC-ATCTCAAGC 225228
Query 61667 ATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGG 61726
| | | || | | || || | || || || || || || || |
Sbjct 225227 AAAGAGCAAGCAAGCAAATCATCCAAGAAATCATCACCGATGCCGTCACCATTGAGCAAG 225168
Query 61727 AATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGC 61786
| || ||||| || ||| |||| | | || |||||||||| | ||| ||| ||
Sbjct 225167 ATTTCCTGACGGAGGCTCTGCCGTGCGCTCTTCTCGGCATGAACTCCACACTGATGAAGC 225108
Query 61787 AGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTAT 61845
| || || ||||| ||||||||||| |||||||| | | | ||| ||||| || | ||
Sbjct 225107 AATACATCGAATTCGTTGCCGACCGCCTGTTGGTTGCTCTCGGGAATGAAAAGG-TGTAC 225049
Query 61846 AATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTT 61905
|| || || || |||||||| ||||| | || || |||| ||||||||| || |||
Sbjct 225048 AAGACAGCGAATCCGTTTGATTTTATGGAGAATATCTCCCTGGGTGGCAAGACCAACTTT 224989
Query 61906 TTCGAGAAACGTGTAGGCGACTATCA 61931
|| ||||| || || || || || ||
Sbjct 224988 TTTGAGAAGCGAGTTGGTGAATACCA 224963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567326494960
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