Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilaginoidea_20virens_20[genbank_20GCA_5F000965225.2_202016-01-29] 139 sequences; 33,567,624 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq6 156 2e-32 >seq6 Length=1035304 Score = 156 bits (172), Expect = 2e-32 Identities = 151/192 (79%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 349026 GCCTGACGAGGTAGACCGACGCATTGGGCTTCTTCATCT--TGGGCGTGGCGTCGAGAAT 349083 || || ||||||| || | | ||||| |||| || | | ||| || | ||| || Sbjct 762495 GCGTGTCGAGGTACACGGCCATGCTGGGCGTCTTGATGTCCTTGGCCAGG--TTGAGGAT 762438 Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||||| ||| ||||| |||||||||| || |||||||||||||||||| Sbjct 762437 CTCCTTGAGCCGGGGCACGCCGAGGGTGACGTTCTTGGACGAGACGCCGGCAAAGTGGAA 762378 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 || | ||| |||| ||||||| ||||||||||||| |||| | ||||||| ||| || Sbjct 762377 CGTGTTGAGCGTCATCTGCGTGGCGGGCTCGCCGATGGACTGCGCGGCGAGGACGCCGAC 762318 Query 349204 CATCTCGCCGGG 349215 |||||||||||| Sbjct 762317 CATCTCGCCGGG 762306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084735396653922