Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq88 168 8e-40 seq72 80.6 3e-13 >seq88 Length=6549 Score = 168 bits (186), Expect = 8e-40 Identities = 125/142 (88%), Gaps = 3/142 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCA-CGTCCTATTCTATTATTCCATGCTAATGTATTC 64 ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 2239 CTAGAAACCAACAAAATAGAACCGCAACGTCCTATTCTATTATTCCATGCTAATGTATTC 2180 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124 | || || |||||||||||||||||||||||| ||| ||||||||||||||||| | | Sbjct 2179 GAGCATAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCCCCGAC 2120 Query 125 ACA-CCAATGAA-GGCATACGG 144 ||| ||| |||| ||||| ||| Sbjct 2119 ACACCCAGTGAAGGGCATGCGG 2098 >seq72 Length=11655 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 7537 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTA 7595 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 7596 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 7633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595197964602