Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq72 111 3e-22 seq3 77.0 5e-12 >seq72 Length=11655 Score = 111 bits (122), Expect = 3e-22 Identities = 100/123 (81%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || ||| | | ||||||| | ||| || ||| || |||| Sbjct 519 GTACGAGAGGAACCGTTGA-TTC-GCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 462 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||| | ||||||||||| |||||||||||||||||||||||| |||| Sbjct 461 GGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCCA 402 Query 121 GAA 123 ||| Sbjct 401 GAA 399 >seq3 Length=3828249 Score = 77.0 bits (84), Expect = 5e-12 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 56 GCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 ||||||| |||| |||||||||||||| | || |||||||||||| | | |||||||| Sbjct 2985662 GCAGTGCTGCGACGCTACCATCTGCTGAACAATAGCTGAACGCCTC-GATTTAGAATCCA 2985604 Query 116 TGCCAGAACGGGGTGATTCTCTCCTGCAC 144 ||||||||| | || || |||| |||| Sbjct 2985603 CGCCAGAACGTGATG-TTACCTCCCGCAC 2985576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197198592