Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq3 313 2e-80
seq1 129 5e-25
>seq3
Length=3828249
Score = 313 bits (346), Expect = 2e-80
Identities = 555/803 (69%), Gaps = 6/803 (1%)
Strand=Plus/Plus
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
|| || |||| || || |||||||||||||| | ||| |||||||| |||||||
Sbjct 3341798 GGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATG 3341857
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
|| ||||||||||| || || ||| ||||| |||| |||| || || ||||||||
Sbjct 3341858 ATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGG 3341917
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
||||| ||||||||||| | |||| | || |||||||||| |||| ||| | ||||
Sbjct 3341918 TTGCAGGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATG 3341977
Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATG 66240
|||| ||| || | ||||||| || | | | ||| | |||| | ||||| |
Sbjct 3341978 GCGTACCACAGCTTCTGAGCCTTCATGGT-CTTGCGGCCGCGGCCTTCTCTCTCGTACTT 3342036
Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300
||||| || ||||| ||||| | ||| | || | || |||| || ||
Sbjct 3342037 CTCGTACAGAGCCTCGAACTCGTCACCGTAGCATTCAGCAAGGCCGGGGCACTCGTTGGG 3342096
Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360
||||| || | ||| || || | || || || || ||| || || ||||| |||||
Sbjct 3342097 GCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCA 3342156
Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420
|||||| |||||| ||||| || || |||||| | ||||| || || ||||| ||
Sbjct 3342157 GAGGGCAAGGAAGAGGTCGCGGGCCCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAATC 3342216
Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480
|||||||||||||| || || |||||||| ||||||||||| ||||| | || |||
Sbjct 3342217 GAGGAACTCAAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACG 3342276
Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540
||| ||||| ||||| ||||| || || |||||||||||||| | ||| || |
Sbjct 3342277 CTTGTTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAAT 3342336
Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600
|| || || || |||| ||||| ||| | || || || || || ||| ||
Sbjct 3342337 GATACCATTTGACGTGCCGTTGGTACCGGCTATATAAGAGCCAGTGGCGCGGATACGATG 3342396
Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTC 66658
|| |||||||||||||| |||||| |||| ||||| || || || | | | ||
Sbjct 3342397 GACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCATGTCTTGAGAGTATC 3342456
Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718
| | || || |||||| |||| |||| ||| | |||| ||||||| || ||
Sbjct 3342457 --GTAGATACCCTCAATGCTGTCATCCTTCATGTCGACGAGGAAGCATGACGACAGCTGA 3342514
Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778
|| | |||||| | || ||| || || || | ||||| || || | | | | |||
Sbjct 3342515 GGCTGGGGTGTACCAGCGTTGAACAGCGTAGGCGATGCGTGTGTGAAAAATTTGTGCGAC 3342574
Query 66779 ATGTAATTGTACGTCTCGATGAC 66801
|| ||||| ||||| || ||
Sbjct 3342575 ATCAGGTTGTAAGTCTCAATCAC 3342597
>seq1
Length=5395810
Score = 129 bits (142), Expect = 5e-25
Identities = 282/422 (67%), Gaps = 3/422 (1%)
Strand=Plus/Minus
Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569
|| |||||| | || ||||| || | || ||| | ||||| ||| ||||||| || ||
Sbjct 863684 GTTGAGGGTATCTTCTTCAGCGGTGCTTTCGCCTCCATCTTCTGGCTGAAGAAGCGCGGT 863625
Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629
|| ||||| || ||||||||| ||| ||| |||| || || |||||||| ||||
Sbjct 863624 CTGATGCCTGGCCTGACCTTCTCCAACGAGCTGATCTCTCGTGACGAGGGTCTGCACACC 863565
Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTG 61689
|| || || |||| ||| | | ||| ||| || || ||| ||| ||
Sbjct 863564 GACTTCGCCTGCCTGCTGTTCTCTCAC---CTGAGGAACCGCCCCAGCAAGGCGCGCGTC 863508
Query 61690 GGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCC 61749
| |||| | ||| || || | || || |||| || |||||||| ||| | |||
Sbjct 863507 GAGAAGATCATCACTGATGCCGTCGCCATTGAGAAGGAGTTCCTGACTGAGGCTCTTCCC 863448
Query 61750 GTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGAC 61809
| || |||||||||| || ||| |||||| || || || || ||||||
Sbjct 863447 TGCAGTCTGCTCGGCATGAACGCCAACCTGATGAAGCAGTACATCGAGTTCGTGGCCGAC 863388
Query 61810 CGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTC 61869
||||| | |||| | || | || | |||| || | | ||||| || || |||
Sbjct 863387 CGTCTCCTCGTCGCCCTTGGCAACGAGAAGGTCTACAAGTCCACCAACCCCTTCGACTTC 863328
Query 61870 ATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTAT 61929
||||| | || || || | |||||||| || || |||||||| ||||| || |||||
Sbjct 863327 ATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 863268
Query 61930 CA 61931
||
Sbjct 863267 CA 863266
Score = 118 bits (130), Expect = 8e-22
Identities = 210/298 (70%), Gaps = 9/298 (3%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||| || |||||||||||||| | |||||| | ||| |
Sbjct 864171 ATATGGCAAATGTACAAGAAGCACGAGGCTTCCTTCTGGACTGCCGAGGAGATTGATCTC 864112
Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTT-ATCGAGCGGTGAACAACATTTCAT-TA 61201
||||| || || | |||||| | || | | || | ||| | | ||||| |
Sbjct 864111 TCCAAGGATCTGCACGACTGGAGCAACCGCCTGAATGAT-GACGAAAAGTACTTCATCTC 864053
Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261
|| ||| | ||||| || ||||| || ||||| ||||| ||||| | | || |
Sbjct 864052 TACCATCCTTGCC-TTCTTCGCTGCTTCCGATGGTATTGTCAACGAGAACCTGGTCGAGC 863994
Query 61262 GTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
||||| |||| | |||| ||| | | ||||| ||||| |||||||||||||||||
Sbjct 863993 GTTTCAGCGCCG-AGGTTCAAATCCCTGAGGCCCGTTGCTTCTACGGCTTCCAGATCATG 863935
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
|||||||| | ||||| |||| ||| | |||||||| || ||||||| |||||
Sbjct 863934 ATGGAGAACATTCACTCCGAGACATACTCCCTGCTCATCGACACATACATCAAGGAGC 863877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397566289587920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |