Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_024909.1
Length=2232
Score E
Sequences producing significant alignments: (Bits) Value
seq195 839 0.0
>seq195
Length=2182
Score = 839 bits (930), Expect = 0.0
Identities = 947/1273 (74%), Gaps = 7/1273 (1%)
Strand=Plus/Minus
Query 265 CCGACGTCGTATGACTTCGCGTCGTGTTCGTGACATTGCGTCTCGGAAAAAATCGGATAC 324
||| | ||| ||||| | || || || || ||||||| | | ||||| |||||
Sbjct 1270 CCGTCCTCGCATGACCCCTCGGCGAGTCCGAAACATTGCCGCCAGAAAAAAGAATGATAC 1211
Query 325 GGTTTTTGGAGCGACCACCAATGATGTCCAGTCAACTG--GACAAGCGAACATTTTTG-C 381
|||||||| || || ||||| |||||| | || | || |||| | || |
Sbjct 1210 TGTTTTTGGTGCCACGCAGAATGACGTCCAG---AGTGAGGGCACCGTAACACTAGTGGC 1154
Query 382 TGGCACCAATTATTTCATTTGGTGTCCTTCCTGGCGCCAGCGGCGCACGGGCTCTACTGA 441
|| || ||||||| ||| ||||||||| | |||||||| || || | | || || ||
Sbjct 1153 CGGAACGAATTATTACATGTGGTGTCCTACGTGGCGCCAACGTCGTCCTGCATCCACCGA 1094
Query 442 TGAGCATGTCCGGGCCAACCAGGAGGTTTACATGCGTGGCATAAAGGATCGAATCATGGT 501
|||||||| |||||||| || || || | |||||||| | |||||||| | |||||
Sbjct 1093 CGAGCATGTTCGGGCCAATCAAGAAGTGTTTATGCGTGGTGTCAAGGATCGTGTGATGGT 1034
Query 502 CTCGGCCACGTTCTCACTTATTCACCGGCGGGTGTGTTTCTGGTCACACCGTCGTATCGA 561
|| || || || || ||| | ||| | || |||||||| ||||| || ||||| ||
Sbjct 1033 GTCTGCGACATTTTCTCTTGTGCACAGACGTGTGTGTTTTTGGTCCCATGAGCGTATTGA 974
Query 562 CGATGCCCGCCCCTATGTCTTTGACAATCCTGATGTCATTGACGCTCCGCAGTACCAGCG 621
|| || || |||| ||||| | ||||| |||||||| | | | || ||| |
Sbjct 973 TGACGCACGGCCCTTCACTTTTGAGGACCCTGACGTCATTGATGGGACCCCTTATCAGAG 914
Query 622 TCGCCCACTGGCTCCGATTTACCCCACTTTGGATTCGGAGATCTTTGAATATTTGTTCAA 681
||| || | | || | ||||| | ||| ||| |||| | |||||| | || ||
Sbjct 913 ACGCAATCTTGTTGCGTTGTACCCGAATTTAGATGAGGAGTTATTTGAAATGCTCTTTAA 854
Query 682 AGGTACGGTCGGGTTTGACTACTCGGAGAACTCCCGATGGGATACCCCGCTCGACAATAA 741
||||| || || || |||||||| || || |||||||| || || || |||||
Sbjct 853 GGGTACTGTTAACCGAGATTATTCGGAGAATTCTCGGTGGGATACTCCTCTTGATAATAA 794
Query 742 GCGGGTTAAAGTGGTGTATGATAAGCAATACACCATTACTCCCAACTACGCTGCCCCCGA 801
|| || || || || || ||||| ||||| || | || || ||||||||| | |||
Sbjct 793 ACGTGTGAAGGTTGTTTACGATAAACAATATACTGTCACCCCTAACTACGCTCCTGGCGA 734
Query 802 GGGCGCTCAGTTTGGGAAGACTATGACAAGGAAGTTGTGGCACCCCATTAATCGGAAAAT 861
|| || |||||||| || || | ||| | ||||| ||||| || || ||||||| ||
Sbjct 733 TGGGGCGCAGTTTGGCAAAACGACTACACGCAAGTTTTGGCATCCTATCAATCGGACTAT 674
Query 862 TCTTTACGATNNNNNNNNNNNNGGTGCCGATGTGAATGGGTCTGGCTGGTCTGCTCAGAC 921
| ||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 673 CATGTACGACGATGATGAGGAAGGTGCCGATGTGAATGGGTCTGGTTGGTCTGCTCAGAC 614
Query 922 CCCTGATAGTCTTGGGAATTACTATGTGTTGGATATCTTTTCTACGGGCCAGTACATTGA 981
|||||| ||||| || |||| ||| || |||||||| |||||||| || || |||||
Sbjct 613 CCCTGAGAGTCTCGGAAATTTCTACGTTTTGGATATATTTTCTACTGGTCAAGCAATTGA 554
Query 982 AGGATCAACCGATCAGGTCGGAACGTATATGCCGGAGTCGACAAGTTATTGGCATGAGGC 1041
||||| || ||| || || | | |||||| ||||| |||| |||||||||||| |
Sbjct 553 TGGATCTACTGATGCTGTGGGGTCATTTATGCCTGAGTCAACAACTTATTGGCATGAATC 494
Query 1042 TAGCTAGATACAATGCAAATTGGATCCACCACATTGATTATGTAACAGTTGTTTATCAAC 1101
||||||| ||| ||||||||||| |||||| |||||| ||||||| | | || |
Sbjct 493 TAGCTAGTTACTTCACAAATTGGATCTGTCACATTTATTATGAAACAGTTTTGCAACAGC 434
Query 1102 CAATCGTAGTCCACCCCTTTAGCGAAGTGCGGGTCCTCATTCATGCACATGATCGAGGGC 1161
|| ||||| || |||||||| || || | ||||| ||||||||||||||||| ||
Sbjct 433 CACTCGTAATCAACCCCTTTTTCGTAGAGTGGGTCAGTGTTCATGCACATGATCGATGGT 374
Query 1162 TTGCCCCAATAGATTGTGCGCTTCTTTCGGTATTTGTCGGTTATGACAAATTGCTTCTGC 1221
|| ||||||| |||||| | ||| || |||||||||||||| ||||||||||| |||||
Sbjct 373 TTCCCCCAATGGATTGTCCTCTTTTTGCGGTATTTGTCGGTAATGACAAATTGTTTCTGA 314
Query 1222 GCACCTAGCCACCCCTTGTAGGAGTGGAAATACTCAAATCCTCCCTGGATGTCGTCGAAG 1281
|| |||| ||| |||||||| ||||| || | || ||||||||||||| ||||||||||
Sbjct 313 GCCCCTAACCATCCCTTGTAAGAGTGAAAGAATTCGAATCCTCCCTGGAGGTCGTCGAAG 254
Query 1282 ACGGNNNNNNNNNNNNNNNNTGAGTATTCGTCCATGTTGAATTGTAGATTGAAGTACGCG 1341
|||| ||| |||| |||||||||||||||| |||||||| ||
Sbjct 253 ACGGCGTATTGACAACTGTCGGAGAATTCATCCATGTTGAATTGTAAGTTGAAGTAGGCA 194
Query 1342 TGTTTTCCGAGGGACCGGGCGTAGAGGGTCTTTCCCGTTCGGGTAGGTCCCCATAGAATG 1401
|||| |||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 193 TGTTCTCCGAGTCCTCTGGCGTAGAGGGTCTTTCCCGTTCGGGTAGGTCCCCATAGAATG 134
Query 1402 AGTGATTTAACTCT-GCTTACGTTAGCACGAGGCCGGCCGTAGAGGGAGGGGCAGGGGcc 1460
|| ||||||||||| | |||||||||||||||||| |||||||||||||||||||||||
Sbjct 133 AGCGATTTAACTCTAGATTACGTTAGCACGAGGCCACCCGTAGAGGGAGGGGCAGGGGCC 74
Query 1461 cccccGAATACCGGAGGCCGGCTAGCAGGATGCGCCTCCACCCCAAGCAAGGATCAGTTC 1520
||||||||||||||||| ||||||||| |||||| ||||||||||| | |||| |
Sbjct 73 CCCCCGAATACCGGAGGGTGGCTAGCAGATTGCGCCAACACCCCAAGCAGGAATCATTAT 14
Query 1521 GGCTGGTGTCGCC 1533
|||||||||||||
Sbjct 13 GGCTGGTGTCGCC 1
Score = 798 bits (884), Expect = 0.0
Identities = 600/701 (86%), Gaps = 13/701 (2%)
Strand=Plus/Minus
Query 1534 GCAGAGCGACGCTTTCGAAACAACTTACCTCTCGGGTCTACTGTCCCCAATGGCTGCCTG 1593
|||||||||||| | || |||||||||||||||| ||||||||||||||||||
Sbjct 2182 GCAGAGCGACGCATACG--------TACCTCTCGGGTCTACAGTCCCCAATGGCTGCCTG 2131
Query 1594 ATTCTCCCACTCGGAGATCTCAGGATAGCGTTCTCTCTCCACAGTCGTATGCGGGGCCTC 1653
||||||||||||||||||||||||||||||||||||| ||||||| | ||| | |
Sbjct 2130 ATTCTCCCACTCGGAGATCTCAGGATAGCGTTCTCTCGCCACAGTGTAACTCGGTGACGT 2071
Query 1654 GTATTCTGGCTTCTCCTCGGGGTAATAAAGATTGGCGTACTCGAGGATGCGCTGATTGGA 1713
|||| ||||||||||||||||| |||||||||||||| ||||| || |||||||||||
Sbjct 2070 GTATGGCGGCTTCTCCTCGGGGTAGTAAAGATTGGCGTATTCGAGTATTCGCTGATTGGA 2011
Query 1714 TAACAACCAATCTCTTGGAGCCTGCTCACGTACCGCTGACAAAAATGATTCTTTGTCGTT 1773
||||| ||||||||||||||||| |||||||| ||||||| |||||||||||| ||||
Sbjct 2010 TAACAGCCAATCTCTTGGAGCCTTGTCACGTACTGCTGACAGAAATGATTCTTTATCGTC 1951
Query 1774 GCAGCTGATGATATCATGCCACTTATTTGAATCATTCCCGTCACGTGAGCGAGCCTCTGC 1833
||||||||||||||||||||| ||||| |||| || |||||||| || | ||
Sbjct 1950 GCAGCTGATGATATCATGCCATTTATTCTGATCAGCTCCCTCACGTGATGAAGGCGTTGT 1891
Query 1834 TGGTGGCTCCCCGTGCTCAAGTCGGATGTCTCCATCCTTGCCGACATAATCGAAGACCTT 1893
|||||| || |||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1890 TGGTGGTTCGCCGTGCTCAAGTCGTATGTCTCCATCCTTCCCGACATAATCGAAGACCTT 1831
Query 1894 GTTTGGAGTTCGACGTACCGATTTAATATTTCCGTGAGCTCCAAAGTAATCGAACGCAGT 1953
|| |||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1830 GTGTGGAGTTCGACGAATTGATTTAATATTTCCGTGAGCTCCGAAGTAGTCGAACGCAGT 1771
Query 1954 AGCCGAGTTGATAGAGACAATCTTGTCGAAGCCAAGATAAACGTGGTAATGGATTCCTCC 2013
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1770 TGCCGAGTTGATACTGACAATCTTGTCGAAGCCAATATAAACGTGGTAATGGATTCCTCC 1711
Query 2014 ATCCGCATGGCGCTCTCGTCCGAGTCGACAGCATAGAGGATTGCCATAATCCGCTGTGAC 2073
|||| |||||||||| ||||||||||| ||||||||||||| ||| ||||| | |||
Sbjct 1710 ATCCTCATGGCGCTCACGTCCGAGTCGTAAGCATAGAGGATTCCCAAAATCCTGTTGGAC 1651
Query 2074 ACGTTCAAGGAAAGGAGTTCCAGCGTCGAATCGTGGTTGGACATCTTCGGAGACTTGGGG 2133
||||||||||||||||||||||||||||||| || ||||| ||| |||| |||||||||
Sbjct 1650 ACGTTCAAGGAAAGGAGTTCCAGCGTCGAATTGTCGTTGGGCATTTTCGTTGACTTGGGG 1591
Query 2134 AAATGTGATGATGAAGTTCCTAGCTCTGCAGCGGAAGCGCGGCAT-TTTAAACT-GCGTT 2191
||| |||| |||| || || ||||||||||||||||| ||||| |||| | |||||
Sbjct 1590 AAAGGTGACTATGAGATTTCTGGCTCTGCAGCGGAAGCGTGGCATATTTATGGTCGCGTT 1531
Query 2192 GGCACGTGACGTGGTCAAATAGGGAGAGAACGCCTAATATT 2232
||||||| | |||||||||||||||||| |||||||
Sbjct 1530 --CACGTGATG-GGTCAAATAGGGAGAGAAGTGGTAATATT 1493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7033573619604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |