Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_024909.1 Length=2232 Score E Sequences producing significant alignments: (Bits) Value seq195 839 0.0 >seq195 Length=2182 Score = 839 bits (930), Expect = 0.0 Identities = 947/1273 (74%), Gaps = 7/1273 (1%) Strand=Plus/Minus Query 265 CCGACGTCGTATGACTTCGCGTCGTGTTCGTGACATTGCGTCTCGGAAAAAATCGGATAC 324 ||| | ||| ||||| | || || || || ||||||| | | ||||| ||||| Sbjct 1270 CCGTCCTCGCATGACCCCTCGGCGAGTCCGAAACATTGCCGCCAGAAAAAAGAATGATAC 1211 Query 325 GGTTTTTGGAGCGACCACCAATGATGTCCAGTCAACTG--GACAAGCGAACATTTTTG-C 381 |||||||| || || ||||| |||||| | || | || |||| | || | Sbjct 1210 TGTTTTTGGTGCCACGCAGAATGACGTCCAG---AGTGAGGGCACCGTAACACTAGTGGC 1154 Query 382 TGGCACCAATTATTTCATTTGGTGTCCTTCCTGGCGCCAGCGGCGCACGGGCTCTACTGA 441 || || ||||||| ||| ||||||||| | |||||||| || || | | || || || Sbjct 1153 CGGAACGAATTATTACATGTGGTGTCCTACGTGGCGCCAACGTCGTCCTGCATCCACCGA 1094 Query 442 TGAGCATGTCCGGGCCAACCAGGAGGTTTACATGCGTGGCATAAAGGATCGAATCATGGT 501 |||||||| |||||||| || || || | |||||||| | |||||||| | ||||| Sbjct 1093 CGAGCATGTTCGGGCCAATCAAGAAGTGTTTATGCGTGGTGTCAAGGATCGTGTGATGGT 1034 Query 502 CTCGGCCACGTTCTCACTTATTCACCGGCGGGTGTGTTTCTGGTCACACCGTCGTATCGA 561 || || || || || ||| | ||| | || |||||||| ||||| || ||||| || Sbjct 1033 GTCTGCGACATTTTCTCTTGTGCACAGACGTGTGTGTTTTTGGTCCCATGAGCGTATTGA 974 Query 562 CGATGCCCGCCCCTATGTCTTTGACAATCCTGATGTCATTGACGCTCCGCAGTACCAGCG 621 || || || |||| ||||| | ||||| |||||||| | | | || ||| | Sbjct 973 TGACGCACGGCCCTTCACTTTTGAGGACCCTGACGTCATTGATGGGACCCCTTATCAGAG 914 Query 622 TCGCCCACTGGCTCCGATTTACCCCACTTTGGATTCGGAGATCTTTGAATATTTGTTCAA 681 ||| || | | || | ||||| | ||| ||| |||| | |||||| | || || Sbjct 913 ACGCAATCTTGTTGCGTTGTACCCGAATTTAGATGAGGAGTTATTTGAAATGCTCTTTAA 854 Query 682 AGGTACGGTCGGGTTTGACTACTCGGAGAACTCCCGATGGGATACCCCGCTCGACAATAA 741 ||||| || || || |||||||| || || |||||||| || || || ||||| Sbjct 853 GGGTACTGTTAACCGAGATTATTCGGAGAATTCTCGGTGGGATACTCCTCTTGATAATAA 794 Query 742 GCGGGTTAAAGTGGTGTATGATAAGCAATACACCATTACTCCCAACTACGCTGCCCCCGA 801 || || || || || || ||||| ||||| || | || || ||||||||| | ||| Sbjct 793 ACGTGTGAAGGTTGTTTACGATAAACAATATACTGTCACCCCTAACTACGCTCCTGGCGA 734 Query 802 GGGCGCTCAGTTTGGGAAGACTATGACAAGGAAGTTGTGGCACCCCATTAATCGGAAAAT 861 || || |||||||| || || | ||| | ||||| ||||| || || ||||||| || Sbjct 733 TGGGGCGCAGTTTGGCAAAACGACTACACGCAAGTTTTGGCATCCTATCAATCGGACTAT 674 Query 862 TCTTTACGATNNNNNNNNNNNNGGTGCCGATGTGAATGGGTCTGGCTGGTCTGCTCAGAC 921 | ||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 673 CATGTACGACGATGATGAGGAAGGTGCCGATGTGAATGGGTCTGGTTGGTCTGCTCAGAC 614 Query 922 CCCTGATAGTCTTGGGAATTACTATGTGTTGGATATCTTTTCTACGGGCCAGTACATTGA 981 |||||| ||||| || |||| ||| || |||||||| |||||||| || || ||||| Sbjct 613 CCCTGAGAGTCTCGGAAATTTCTACGTTTTGGATATATTTTCTACTGGTCAAGCAATTGA 554 Query 982 AGGATCAACCGATCAGGTCGGAACGTATATGCCGGAGTCGACAAGTTATTGGCATGAGGC 1041 ||||| || ||| || || | | |||||| ||||| |||| |||||||||||| | Sbjct 553 TGGATCTACTGATGCTGTGGGGTCATTTATGCCTGAGTCAACAACTTATTGGCATGAATC 494 Query 1042 TAGCTAGATACAATGCAAATTGGATCCACCACATTGATTATGTAACAGTTGTTTATCAAC 1101 ||||||| ||| ||||||||||| |||||| |||||| ||||||| | | || | Sbjct 493 TAGCTAGTTACTTCACAAATTGGATCTGTCACATTTATTATGAAACAGTTTTGCAACAGC 434 Query 1102 CAATCGTAGTCCACCCCTTTAGCGAAGTGCGGGTCCTCATTCATGCACATGATCGAGGGC 1161 || ||||| || |||||||| || || | ||||| ||||||||||||||||| || Sbjct 433 CACTCGTAATCAACCCCTTTTTCGTAGAGTGGGTCAGTGTTCATGCACATGATCGATGGT 374 Query 1162 TTGCCCCAATAGATTGTGCGCTTCTTTCGGTATTTGTCGGTTATGACAAATTGCTTCTGC 1221 || ||||||| |||||| | ||| || |||||||||||||| ||||||||||| ||||| Sbjct 373 TTCCCCCAATGGATTGTCCTCTTTTTGCGGTATTTGTCGGTAATGACAAATTGTTTCTGA 314 Query 1222 GCACCTAGCCACCCCTTGTAGGAGTGGAAATACTCAAATCCTCCCTGGATGTCGTCGAAG 1281 || |||| ||| |||||||| ||||| || | || ||||||||||||| |||||||||| Sbjct 313 GCCCCTAACCATCCCTTGTAAGAGTGAAAGAATTCGAATCCTCCCTGGAGGTCGTCGAAG 254 Query 1282 ACGGNNNNNNNNNNNNNNNNTGAGTATTCGTCCATGTTGAATTGTAGATTGAAGTACGCG 1341 |||| ||| |||| |||||||||||||||| |||||||| || Sbjct 253 ACGGCGTATTGACAACTGTCGGAGAATTCATCCATGTTGAATTGTAAGTTGAAGTAGGCA 194 Query 1342 TGTTTTCCGAGGGACCGGGCGTAGAGGGTCTTTCCCGTTCGGGTAGGTCCCCATAGAATG 1401 |||| |||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 193 TGTTCTCCGAGTCCTCTGGCGTAGAGGGTCTTTCCCGTTCGGGTAGGTCCCCATAGAATG 134 Query 1402 AGTGATTTAACTCT-GCTTACGTTAGCACGAGGCCGGCCGTAGAGGGAGGGGCAGGGGcc 1460 || ||||||||||| | |||||||||||||||||| ||||||||||||||||||||||| Sbjct 133 AGCGATTTAACTCTAGATTACGTTAGCACGAGGCCACCCGTAGAGGGAGGGGCAGGGGCC 74 Query 1461 cccccGAATACCGGAGGCCGGCTAGCAGGATGCGCCTCCACCCCAAGCAAGGATCAGTTC 1520 ||||||||||||||||| ||||||||| |||||| ||||||||||| | |||| | Sbjct 73 CCCCCGAATACCGGAGGGTGGCTAGCAGATTGCGCCAACACCCCAAGCAGGAATCATTAT 14 Query 1521 GGCTGGTGTCGCC 1533 ||||||||||||| Sbjct 13 GGCTGGTGTCGCC 1 Score = 798 bits (884), Expect = 0.0 Identities = 600/701 (86%), Gaps = 13/701 (2%) Strand=Plus/Minus Query 1534 GCAGAGCGACGCTTTCGAAACAACTTACCTCTCGGGTCTACTGTCCCCAATGGCTGCCTG 1593 |||||||||||| | || |||||||||||||||| |||||||||||||||||| Sbjct 2182 GCAGAGCGACGCATACG--------TACCTCTCGGGTCTACAGTCCCCAATGGCTGCCTG 2131 Query 1594 ATTCTCCCACTCGGAGATCTCAGGATAGCGTTCTCTCTCCACAGTCGTATGCGGGGCCTC 1653 ||||||||||||||||||||||||||||||||||||| ||||||| | ||| | | Sbjct 2130 ATTCTCCCACTCGGAGATCTCAGGATAGCGTTCTCTCGCCACAGTGTAACTCGGTGACGT 2071 Query 1654 GTATTCTGGCTTCTCCTCGGGGTAATAAAGATTGGCGTACTCGAGGATGCGCTGATTGGA 1713 |||| ||||||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct 2070 GTATGGCGGCTTCTCCTCGGGGTAGTAAAGATTGGCGTATTCGAGTATTCGCTGATTGGA 2011 Query 1714 TAACAACCAATCTCTTGGAGCCTGCTCACGTACCGCTGACAAAAATGATTCTTTGTCGTT 1773 ||||| ||||||||||||||||| |||||||| ||||||| |||||||||||| |||| Sbjct 2010 TAACAGCCAATCTCTTGGAGCCTTGTCACGTACTGCTGACAGAAATGATTCTTTATCGTC 1951 Query 1774 GCAGCTGATGATATCATGCCACTTATTTGAATCATTCCCGTCACGTGAGCGAGCCTCTGC 1833 ||||||||||||||||||||| ||||| |||| || |||||||| || | || Sbjct 1950 GCAGCTGATGATATCATGCCATTTATTCTGATCAGCTCCCTCACGTGATGAAGGCGTTGT 1891 Query 1834 TGGTGGCTCCCCGTGCTCAAGTCGGATGTCTCCATCCTTGCCGACATAATCGAAGACCTT 1893 |||||| || |||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 1890 TGGTGGTTCGCCGTGCTCAAGTCGTATGTCTCCATCCTTCCCGACATAATCGAAGACCTT 1831 Query 1894 GTTTGGAGTTCGACGTACCGATTTAATATTTCCGTGAGCTCCAAAGTAATCGAACGCAGT 1953 || |||||||||||| | ||||||||||||||||||||||| ||||| ||||||||||| Sbjct 1830 GTGTGGAGTTCGACGAATTGATTTAATATTTCCGTGAGCTCCGAAGTAGTCGAACGCAGT 1771 Query 1954 AGCCGAGTTGATAGAGACAATCTTGTCGAAGCCAAGATAAACGTGGTAATGGATTCCTCC 2013 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1770 TGCCGAGTTGATACTGACAATCTTGTCGAAGCCAATATAAACGTGGTAATGGATTCCTCC 1711 Query 2014 ATCCGCATGGCGCTCTCGTCCGAGTCGACAGCATAGAGGATTGCCATAATCCGCTGTGAC 2073 |||| |||||||||| ||||||||||| ||||||||||||| ||| ||||| | ||| Sbjct 1710 ATCCTCATGGCGCTCACGTCCGAGTCGTAAGCATAGAGGATTCCCAAAATCCTGTTGGAC 1651 Query 2074 ACGTTCAAGGAAAGGAGTTCCAGCGTCGAATCGTGGTTGGACATCTTCGGAGACTTGGGG 2133 ||||||||||||||||||||||||||||||| || ||||| ||| |||| ||||||||| Sbjct 1650 ACGTTCAAGGAAAGGAGTTCCAGCGTCGAATTGTCGTTGGGCATTTTCGTTGACTTGGGG 1591 Query 2134 AAATGTGATGATGAAGTTCCTAGCTCTGCAGCGGAAGCGCGGCAT-TTTAAACT-GCGTT 2191 ||| |||| |||| || || ||||||||||||||||| ||||| |||| | ||||| Sbjct 1590 AAAGGTGACTATGAGATTTCTGGCTCTGCAGCGGAAGCGTGGCATATTTATGGTCGCGTT 1531 Query 2192 GGCACGTGACGTGGTCAAATAGGGAGAGAACGCCTAATATT 2232 ||||||| | |||||||||||||||||| ||||||| Sbjct 1530 --CACGTGATG-GGTCAAATAGGGAGAGAAGTGGTAATATT 1493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7033573619604