Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_026144.1
Length=2115
Score E
Sequences producing significant alignments: (Bits) Value
seq195 318 8e-84
>seq195
Length=2182
Score = 318 bits (352), Expect = 8e-84
Identities = 367/488 (75%), Gaps = 11/488 (2%)
Strand=Plus/Minus
Query 863 GGTAATTTTTACATCCTAGATATGTTTTCTACTGGTCAGGACGTTCCGTCCGAATCCGCT 922
|| ||||| ||| | | ||||| |||||||||||||| | || | ||| |
Sbjct 600 GGAAATTTCTACGTTTTGGATATATTTTCTACTGGTCAAGCAATTGAT---GGATC---T 547
Query 923 ACTCAA--TGTGGG-TCATATTCCACTGAGTCAACTGTTTATTGGCATGAATCTAGCTAG 979
||| | |||||| |||| | |||||||||| ||||||||||||||||||||||
Sbjct 546 ACTGATGCTGTGGGGTCATTTATGCCTGAGTCAACAACTTATTGGCATGAATCTAGCTAG 487
Query 980 ATAAATGACAAATCGGGTCTAAGACCTCTATGATGACACAATTTAACTGTAACCACTCGT 1039
|| | |||||| || ||| || | ||| |||| ||| ||| | | ||||||||
Sbjct 486 TTACTTCACAAATTGGATCTGTCACATTTATTATGAAACAGTTTTGCAACAGCCACTCGT 427
Query 1040 AGTCTACTCCCTTTAGAAAATTTGGATTTTCGTTCAAGCACATGATCGTAGGCTTTCCCC 1099
| || || || ||| | ||| | ||||| ||||||||||| || || ||||
Sbjct 426 AATCAACCCCTTTTTCGTAGAGTGGGTCAGTGTTCATGCACATGATCGATGGTTTCCCCC 367
Query 1100 ACTTTATCGTCCGCTTCTTCCGATACTTATCGGTGATGACAAATTCCTTCTGGGCGCCTA 1159
| | || |||| ||| || || || || ||||| |||||||||| ||||| || ||||
Sbjct 366 AATGGATTGTCCTCTTTTTGCGGTATTTGTCGGTAATGACAAATTGTTTCTGAGCCCCTA 307
Query 1160 ACCATCCCTTGTATGAGTGCCAGAACTCGAATCCTCCCTGGATGTCGTCGAAGACGGCGT 1219
||||||||||||| ||||| |||| |||||||||||||||| |||||||||||||||||
Sbjct 306 ACCATCCCTTGTAAGAGTGAAAGAATTCGAATCCTCCCTGGAGGTCGTCGAAGACGGCGT 247
Query 1220 ATTTGACTCC-GTCGCTGAATCCGTCCATATTGAATTGGAGGTTGAAGTATGCATGTTCT 1278
||| ||| | |||| |||| | ||||| |||||||| | ||||||||| |||||||||
Sbjct 246 ATT-GACAACTGTCGGAGAATTCATCCATGTTGAATTGTAAGTTGAAGTAGGCATGTTCT 188
Query 1279 CCCAATGACCGGGCGAAGAGGGTCTTCCCCGTTCGGGAAGGTCCATATAAAATGAGTGAC 1338
|| | | | |||| |||||||||| |||||||||| |||||| ||| |||||| ||
Sbjct 187 CCGAGTCCTCTGGCGTAGAGGGTCTTTCCCGTTCGGGTAGGTCCCCATAGAATGAGCGAT 128
Query 1339 TTAACTCT 1346
||||||||
Sbjct 127 TTAACTCT 120
Score = 161 bits (178), Expect = 1e-36
Identities = 228/318 (72%), Gaps = 7/318 (2%)
Strand=Plus/Minus
Query 1727 GGAGGGTCGCCTCGCTCATATCGTACATCGCCATCCTTTCCGCAGTAATCGTAGACTGTC 1786
|| || ||||| ||||| ||||| || |||||||| ||| |||||| |||| |
Sbjct 1889 GGTGGTTCGCCGTGCTCAAGTCGTATGTCTCCATCCTTCCCGACATAATCGAAGACCTTG 1830
Query 1787 CTTGGAGTTCGTCGTACCGATTTAATATTTCCGTGAGCTCCGAAGTAATCGAACAGGTTT 1846
||||||||| || | ||||||||||||||||||||||||||||| |||||| ||
Sbjct 1829 TGTGGAGTTCGACGAATTGATTTAATATTTCCGTGAGCTCCGAAGTAGTCGAACGCAGTT 1770
Query 1847 GCGCGGTTGATATGGACAACCTCATCGAAGCCAATGTACATATGGTAATGAACTCCTCCA 1906
|| ||||||| ||||| || ||||||||||| || | |||||||| | |||||||
Sbjct 1769 GCCGAGTTGATACTGACAATCTTGTCGAAGCCAATATAAACGTGGTAATGGATTCCTCCA 1710
Query 1907 TCCTGGTGACGTTCTCTTCCCAGCCGGAAGCATGAAGGATCTTTGAGATCTTGAGTGATA 1966
|||| || || || | ||| || || |||||| ||||| | ||| || || |
Sbjct 1709 TCCTCATGGCGCTCACGTCCGAGTCGTAAGCATAGAGGATTCCCAAAATCCTGTTGGACA 1650
Query 1967 --TTGAGCAGCAAACTTGCCCCCTCGTGATCGAATCGCTGTTGGACATCTTCACTAACTT 2024
|| | || ||| | || || |||||| | ||||| ||| ||| | ||||
Sbjct 1649 CGTTCA--AGGAAAGGAGTTCCAGCG---TCGAATTGTCGTTGGGCATTTTCGTTGACTT 1595
Query 2025 GTGGAAAAGTGACTATGA 2042
| ||||| ||||||||||
Sbjct 1594 GGGGAAAGGTGACTATGA 1577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6659175023838
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |