Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_026144.1 Length=2115 Score E Sequences producing significant alignments: (Bits) Value seq195 318 8e-84 >seq195 Length=2182 Score = 318 bits (352), Expect = 8e-84 Identities = 367/488 (75%), Gaps = 11/488 (2%) Strand=Plus/Minus Query 863 GGTAATTTTTACATCCTAGATATGTTTTCTACTGGTCAGGACGTTCCGTCCGAATCCGCT 922 || ||||| ||| | | ||||| |||||||||||||| | || | ||| | Sbjct 600 GGAAATTTCTACGTTTTGGATATATTTTCTACTGGTCAAGCAATTGAT---GGATC---T 547 Query 923 ACTCAA--TGTGGG-TCATATTCCACTGAGTCAACTGTTTATTGGCATGAATCTAGCTAG 979 ||| | |||||| |||| | |||||||||| |||||||||||||||||||||| Sbjct 546 ACTGATGCTGTGGGGTCATTTATGCCTGAGTCAACAACTTATTGGCATGAATCTAGCTAG 487 Query 980 ATAAATGACAAATCGGGTCTAAGACCTCTATGATGACACAATTTAACTGTAACCACTCGT 1039 || | |||||| || ||| || | ||| |||| ||| ||| | | |||||||| Sbjct 486 TTACTTCACAAATTGGATCTGTCACATTTATTATGAAACAGTTTTGCAACAGCCACTCGT 427 Query 1040 AGTCTACTCCCTTTAGAAAATTTGGATTTTCGTTCAAGCACATGATCGTAGGCTTTCCCC 1099 | || || || ||| | ||| | ||||| ||||||||||| || || |||| Sbjct 426 AATCAACCCCTTTTTCGTAGAGTGGGTCAGTGTTCATGCACATGATCGATGGTTTCCCCC 367 Query 1100 ACTTTATCGTCCGCTTCTTCCGATACTTATCGGTGATGACAAATTCCTTCTGGGCGCCTA 1159 | | || |||| ||| || || || || ||||| |||||||||| ||||| || |||| Sbjct 366 AATGGATTGTCCTCTTTTTGCGGTATTTGTCGGTAATGACAAATTGTTTCTGAGCCCCTA 307 Query 1160 ACCATCCCTTGTATGAGTGCCAGAACTCGAATCCTCCCTGGATGTCGTCGAAGACGGCGT 1219 ||||||||||||| ||||| |||| |||||||||||||||| ||||||||||||||||| Sbjct 306 ACCATCCCTTGTAAGAGTGAAAGAATTCGAATCCTCCCTGGAGGTCGTCGAAGACGGCGT 247 Query 1220 ATTTGACTCC-GTCGCTGAATCCGTCCATATTGAATTGGAGGTTGAAGTATGCATGTTCT 1278 ||| ||| | |||| |||| | ||||| |||||||| | ||||||||| ||||||||| Sbjct 246 ATT-GACAACTGTCGGAGAATTCATCCATGTTGAATTGTAAGTTGAAGTAGGCATGTTCT 188 Query 1279 CCCAATGACCGGGCGAAGAGGGTCTTCCCCGTTCGGGAAGGTCCATATAAAATGAGTGAC 1338 || | | | |||| |||||||||| |||||||||| |||||| ||| |||||| || Sbjct 187 CCGAGTCCTCTGGCGTAGAGGGTCTTTCCCGTTCGGGTAGGTCCCCATAGAATGAGCGAT 128 Query 1339 TTAACTCT 1346 |||||||| Sbjct 127 TTAACTCT 120 Score = 161 bits (178), Expect = 1e-36 Identities = 228/318 (72%), Gaps = 7/318 (2%) Strand=Plus/Minus Query 1727 GGAGGGTCGCCTCGCTCATATCGTACATCGCCATCCTTTCCGCAGTAATCGTAGACTGTC 1786 || || ||||| ||||| ||||| || |||||||| ||| |||||| |||| | Sbjct 1889 GGTGGTTCGCCGTGCTCAAGTCGTATGTCTCCATCCTTCCCGACATAATCGAAGACCTTG 1830 Query 1787 CTTGGAGTTCGTCGTACCGATTTAATATTTCCGTGAGCTCCGAAGTAATCGAACAGGTTT 1846 ||||||||| || | ||||||||||||||||||||||||||||| |||||| || Sbjct 1829 TGTGGAGTTCGACGAATTGATTTAATATTTCCGTGAGCTCCGAAGTAGTCGAACGCAGTT 1770 Query 1847 GCGCGGTTGATATGGACAACCTCATCGAAGCCAATGTACATATGGTAATGAACTCCTCCA 1906 || ||||||| ||||| || ||||||||||| || | |||||||| | ||||||| Sbjct 1769 GCCGAGTTGATACTGACAATCTTGTCGAAGCCAATATAAACGTGGTAATGGATTCCTCCA 1710 Query 1907 TCCTGGTGACGTTCTCTTCCCAGCCGGAAGCATGAAGGATCTTTGAGATCTTGAGTGATA 1966 |||| || || || | ||| || || |||||| ||||| | ||| || || | Sbjct 1709 TCCTCATGGCGCTCACGTCCGAGTCGTAAGCATAGAGGATTCCCAAAATCCTGTTGGACA 1650 Query 1967 --TTGAGCAGCAAACTTGCCCCCTCGTGATCGAATCGCTGTTGGACATCTTCACTAACTT 2024 || | || ||| | || || |||||| | ||||| ||| ||| | |||| Sbjct 1649 CGTTCA--AGGAAAGGAGTTCCAGCG---TCGAATTGTCGTTGGGCATTTTCGTTGACTT 1595 Query 2025 GTGGAAAAGTGACTATGA 2042 | ||||| |||||||||| Sbjct 1594 GGGGAAAGGTGACTATGA 1577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6659175023838