Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20] 353 sequences; 44,725,953 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq12 86.0 2e-11 seq7 86.0 2e-11 >seq12 Length=1424102 Score = 86.0 bits (94), Expect = 2e-11 Identities = 109/145 (75%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 364427 ATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCA 364486 || |||||||| || ||||||| | | |||||||||||||| || ||| | || || Sbjct 98863 ATTGTCATACGCGATGGAATGGCGTGGGGGTTGATGATGATATCGGGCGTGACACCCTC- 98921 Query 364487 GCG-GTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 ||| || || ||||| ||||| || || | | ||| |||||| || ||||| || ||| Sbjct 98922 GCGAGTGAACGGCATGTCTTCCTGACGGTAAG-TGACACCAATAGTGCCCTTCTGACCAT 98980 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 ||||| || |||||||| ||||| Sbjct 98981 GACGAGATGCGAACTTGTCACCAAT 99005 >seq7 Length=2986693 Score = 86.0 bits (94), Expect = 2e-11 Identities = 210/316 (66%), Gaps = 2/316 (1%) Strand=Plus/Plus Query 12731 AGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAA 12790 || |||||||| ||| || |||||||| | ||| || |||||||| | ||| | Sbjct 117454 AGCACATCGTAGTAGATGACGTTCATGCCCATGGCCTCAGCCAGGACAGACAGCTGGGCG 117513 Query 12791 CCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGA 12850 || |||| ||||| || | || || || ||||| || | | || | ||| | | || Sbjct 117514 CCGATGTGGCCATAGCCGATAATTCCCAGTGTCTTGCCACGGATCTCCCAGCA-CTTGGA 117572 Query 12851 GAAGTC-TTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGA 12909 | | | |||||||| | || |||| || || || | || || | ||| || | Sbjct 117573 GCTGACCTTGTTCCAGGTTCCACGGTGCAGCTCCATGGAGCGGTCGCCCAACTGGCGGGC 117632 Query 12910 AAGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGA 12969 || | || | | || || |||||||| || || || | || |||| || ||||| Sbjct 117633 CAGGATGATGATCTCACCGATCATGAGCTCGGCTACACTGCGAGAGTTGGCGAAAGGAGA 117692 Query 12970 ATTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAAT 13029 || || || |||||||| | |||| ||| || |||| ||||| | | ||| || Sbjct 117693 GTTGAAAACGGCAATGCCATGCTTGGCAGCGTACTCCAGATCCACCTGGTTGGTACCGAT 117752 Query 13030 GCAGAAGCATCCTATG 13045 ||||||||| || ||| Sbjct 117753 GCAGAAGCAGCCAATG 117768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884877875012229