Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20[genbank_20GCA_5F000818155.1_202015-01-20]
353 sequences; 44,725,953 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq12 86.0 2e-11
seq7 86.0 2e-11
>seq12
Length=1424102
Score = 86.0 bits (94), Expect = 2e-11
Identities = 109/145 (75%), Gaps = 4/145 (3%)
Strand=Plus/Plus
Query 364427 ATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCA 364486
|| |||||||| || ||||||| | | |||||||||||||| || ||| | || ||
Sbjct 98863 ATTGTCATACGCGATGGAATGGCGTGGGGGTTGATGATGATATCGGGCGTGACACCCTC- 98921
Query 364487 GCG-GTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544
||| || || ||||| ||||| || || | | ||| |||||| || ||||| || |||
Sbjct 98922 GCGAGTGAACGGCATGTCTTCCTGACGGTAAG-TGACACCAATAGTGCCCTTCTGACCAT 98980
Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569
||||| || |||||||| |||||
Sbjct 98981 GACGAGATGCGAACTTGTCACCAAT 99005
>seq7
Length=2986693
Score = 86.0 bits (94), Expect = 2e-11
Identities = 210/316 (66%), Gaps = 2/316 (1%)
Strand=Plus/Plus
Query 12731 AGAACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAA 12790
|| |||||||| ||| || |||||||| | ||| || |||||||| | ||| |
Sbjct 117454 AGCACATCGTAGTAGATGACGTTCATGCCCATGGCCTCAGCCAGGACAGACAGCTGGGCG 117513
Query 12791 CCAATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGA 12850
|| |||| ||||| || | || || || ||||| || | | || | ||| | | ||
Sbjct 117514 CCGATGTGGCCATAGCCGATAATTCCCAGTGTCTTGCCACGGATCTCCCAGCA-CTTGGA 117572
Query 12851 GAAGTC-TTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGA 12909
| | | |||||||| | || |||| || || || | || || | ||| || |
Sbjct 117573 GCTGACCTTGTTCCAGGTTCCACGGTGCAGCTCCATGGAGCGGTCGCCCAACTGGCGGGC 117632
Query 12910 AAGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGA 12969
|| | || | | || || |||||||| || || || | || |||| || |||||
Sbjct 117633 CAGGATGATGATCTCACCGATCATGAGCTCGGCTACACTGCGAGAGTTGGCGAAAGGAGA 117692
Query 12970 ATTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAAT 13029
|| || || |||||||| | |||| ||| || |||| ||||| | | ||| ||
Sbjct 117693 GTTGAAAACGGCAATGCCATGCTTGGCAGCGTACTCCAGATCCACCTGGTTGGTACCGAT 117752
Query 13030 GCAGAAGCATCCTATG 13045
||||||||| || |||
Sbjct 117753 GCAGAAGCAGCCAATG 117768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884877875012229
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |