Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq329 158 7e-37
seq392 104 1e-20
>seq329
Length=1382
Score = 158 bits (174), Expect = 7e-37
Identities = 106/117 (91%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||| |||| ||||||||||||||||||||| | ||||||||||||
Sbjct 264 GAACCCAAAAACTTTACTTTCGTGTAAGGTGCCGAGCGAGTCAAGAA-ATAACATCGCCC 322
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||
Sbjct 323 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACAACGGTATCTGATCGTTTTCGA 379
>seq392
Length=597
Score = 104 bits (114), Expect = 1e-20
Identities = 93/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| || ||| |||| ||| |||| ||||| ||||
Sbjct 122 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 181
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||| | ||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 182 CATCGCCAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278398760250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |