Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq329 499 6e-139 seq392 174 3e-41 >seq329 Length=1382 Score = 499 bits (552), Expect = 6e-139 Identities = 301/315 (96%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 694 TGGTCCGGCCGGGCCTTTCCCTCTGGGGATCCGCATGCCCTTCACTGGGTGTGTCGGGGA 635 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 634 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 575 Query 125 TAGCATGGAATAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 574 TAGCATGGAATAATAGAATAGGACGTTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 515 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 514 TAATGATTAATAGGGACAGTCGGGGGCGTCAGTATTCAATCGTCAGAGGTGAAATTCTTG 455 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | Sbjct 454 GATCGATTGAAGACTAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAG-G 396 Query 304 AACGAAAGTTAGGGG 318 ||||||||||||||| Sbjct 395 AACGAAAGTTAGGGG 381 >seq392 Length=597 Score = 174 bits (192), Expect = 3e-41 Identities = 208/278 (75%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | |||||||||||||||||||||||| Sbjct 521 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 462 Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 |||||||||||| || | |||| ||| |||||||| ||||||||| |||| Sbjct 461 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 403 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||||| | || | | |||||||| ||||| | |||||| | Sbjct 402 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 343 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| | |||||||||||||||||| ||||| || | |||||||| Sbjct 342 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 283 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 || ||||| |||||||||||||||| |||||||||| Sbjct 282 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915195652800