Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq329 499 6e-139
seq392 174 3e-41
>seq329
Length=1382
Score = 499 bits (552), Expect = 6e-139
Identities = 301/315 (96%), Gaps = 2/315 (1%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 694 TGGTCCGGCCGGGCCTTTCCCTCTGGGGATCCGCATGCCCTTCACTGGGTGTGTCGGGGA 635
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct 634 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 575
Query 125 TAGCATGGAATAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 574 TAGCATGGAATAATAGAATAGGACGTTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 515
Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243
|||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 514 TAATGATTAATAGGGACAGTCGGGGGCGTCAGTATTCAATCGTCAGAGGTGAAATTCTTG 455
Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303
||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
Sbjct 454 GATCGATTGAAGACTAACTACTGCGAAAGCATTCGCCAAGGATGTTTTCATTAATCAG-G 396
Query 304 AACGAAAGTTAGGGG 318
|||||||||||||||
Sbjct 395 AACGAAAGTTAGGGG 381
>seq392
Length=597
Score = 174 bits (192), Expect = 3e-41
Identities = 208/278 (75%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 521 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 462
Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||||||| || | |||| ||| |||||||| ||||||||| ||||
Sbjct 461 TCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 403
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||||||||||||||| | || | | |||||||| ||||| | |||||| |
Sbjct 402 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 343
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | |||||||||||||||||| ||||| || | ||||||||
Sbjct 342 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 283
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| ||||| |||||||||||||||| ||||||||||
Sbjct 282 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915195652800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |