Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq298 661 0.0
seq381 149 3e-33
seq441 122 4e-25
>seq298
Length=2671
Score = 661 bits (732), Expect = 0.0
Identities = 555/673 (82%), Gaps = 11/673 (2%)
Strand=Plus/Minus
Query 15 CCTAGCC-GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGG 73
|| |||| ||||||||||||||| ||||||||||| |||||||||||| |||| ||||||
Sbjct 2041 CCAAGCCTGTGTGAAGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGG 1982
Query 74 GAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTG 133
||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1981 GAGGTAAATCTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTG 1922
Query 134 ATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193
||||||||||||||||||| ||| |||| | |||||| || |||||||||||||||||||
Sbjct 1921 ATCGAAAGATGAAAAGCACCTTGAAAAGGGGGTTAAACAGTACGTGAAATTGTTGAAAGG 1862
Query 194 GAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACT 252
|||||||||| ||||||||||| | | ||||| | || ||| || |||||||
Sbjct 1861 GAAGCGCTTGTGACCAGACTTGCGCCGGGCGGCTCATCAGGGGTTCTC-CCCTGTGCACT 1803
Query 253 CTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCC 312
| | | ||||||||||||| | || | || |||||| | ||||| ||||||
Sbjct 1802 CCGCCCGGCTCAGGCCAGCATCGGTTCTCGTGGGAGGATAAGAACGGTGGGAACGTGGCC 1743
Query 313 CCCTTC--GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGC 370
||| || ||||||||||||||||| || || | | || |||| ||||| |||
Sbjct 1742 CCCCTCCGGGGGGGTGTTATAGCCCACCGTACGATAC-TCTCGTGGGGACCGAGGTTCGC 1684
Query 371 GCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAG 430
||||| || ||||||||||||||||||| | |||| ||||||||| |||||||||||||
Sbjct 1683 GCTCC-GCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAG 1625
Query 431 GAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACG 490
||||| ||| ||||| |||||||||| ||||||| |||||||||||||||||||
Sbjct 1624 GAGTCGTCCATTAGAGCGAGCGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACG 1565
Query 491 GAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGA 550
||||| || | || ||| |||||||||||||||||||||||||||||||||||
Sbjct 1564 CAGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGA 1509
Query 551 GTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCC 610
||||||| | | |||||||||||| ||||||||||| || |||||||||||||
Sbjct 1508 GTAAGAGTTTTAACGGACGGACCCGAAAGACAGTGAACTATGCTTGTATAGGGTGAAGCC 1449
Query 611 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTG 670
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 1448 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATG 1389
Query 671 GGTATAGGGGCGA 683
| || |||||||
Sbjct 1388 AGCATGGGGGCGA 1376
>seq381
Length=678
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 618 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 559
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 558 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 499
>seq441
Length=281
Score = 122 bits (134), Expect = 4e-25
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 214 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 155
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 154 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 95
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 94 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 55
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079989811250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |