Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq298 661 0.0 seq381 149 3e-33 seq441 122 4e-25 >seq298 Length=2671 Score = 661 bits (732), Expect = 0.0 Identities = 555/673 (82%), Gaps = 11/673 (2%) Strand=Plus/Minus Query 15 CCTAGCC-GTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGG 73 || |||| ||||||||||||||| ||||||||||| |||||||||||| |||| |||||| Sbjct 2041 CCAAGCCTGTGTGAAGCTCCTTCAACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATGG 1982 Query 74 GAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTG 133 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1981 GAGGTAAATCTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTG 1922 Query 134 ATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193 ||||||||||||||||||| ||| |||| | |||||| || ||||||||||||||||||| Sbjct 1921 ATCGAAAGATGAAAAGCACCTTGAAAAGGGGGTTAAACAGTACGTGAAATTGTTGAAAGG 1862 Query 194 GAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAAC-CGGCCCCTCGGCCGGTGCACT 252 |||||||||| ||||||||||| | | ||||| | || ||| || ||||||| Sbjct 1861 GAAGCGCTTGTGACCAGACTTGCGCCGGGCGGCTCATCAGGGGTTCTC-CCCTGTGCACT 1803 Query 253 CTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCC 312 | | | ||||||||||||| | || | || |||||| | ||||| |||||| Sbjct 1802 CCGCCCGGCTCAGGCCAGCATCGGTTCTCGTGGGAGGATAAGAACGGTGGGAACGTGGCC 1743 Query 313 CCCTTC--GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGC 370 ||| || ||||||||||||||||| || || | | || |||| ||||| ||| Sbjct 1742 CCCCTCCGGGGGGGTGTTATAGCCCACCGTACGATAC-TCTCGTGGGGACCGAGGTTCGC 1684 Query 371 GCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAG 430 ||||| || ||||||||||||||||||| | |||| ||||||||| ||||||||||||| Sbjct 1683 GCTCC-GCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCAAG 1625 Query 431 GAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACG 490 ||||| ||| ||||| |||||||||| ||||||| ||||||||||||||||||| Sbjct 1624 GAGTCGTCCATTAGAGCGAGCGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACG 1565 Query 491 GAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGA 550 ||||| || | || ||| ||||||||||||||||||||||||||||||||||| Sbjct 1564 CAGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGA 1509 Query 551 GTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCC 610 ||||||| | | |||||||||||| ||||||||||| || ||||||||||||| Sbjct 1508 GTAAGAGTTTTAACGGACGGACCCGAAAGACAGTGAACTATGCTTGTATAGGGTGAAGCC 1449 Query 611 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTG 670 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct 1448 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATATG 1389 Query 671 GGTATAGGGGCGA 683 | || ||||||| Sbjct 1388 AGCATGGGGGCGA 1376 >seq381 Length=678 Score = 149 bits (164), Expect = 3e-33 Identities = 105/120 (88%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 618 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 559 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || |||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 558 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 499 >seq441 Length=281 Score = 122 bits (134), Expect = 4e-25 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 214 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 155 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 154 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 95 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 94 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 55 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079989811250