Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq378 264 2e-68
seq437 244 2e-62
seq329 194 3e-47
>seq378
Length=711
Score = 264 bits (292), Expect = 2e-68
Identities = 179/197 (91%), Gaps = 3/197 (2%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 195 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 136
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| |||| | |||| ||||||||||||||||||| ||
Sbjct 135 ACCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCGGC 77
Query 121 CACCAACCATAGTC-GATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
||| || ||| | | |||||||||||||||||||||||||||||||||||| ||||
Sbjct 76 GACCCGCC-TAGGCGGGCCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 18
Query 180 AACCAGACAAATCACTC 196
|| ||||||||||||||
Sbjct 17 AAGCAGACAAATCACTC 1
>seq437
Length=288
Score = 244 bits (270), Expect = 2e-62
Identities = 208/251 (83%), Gaps = 9/251 (4%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |
Sbjct 7 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 65
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130
||| || | |||||| | |||| | |||||||||||||| | | || ||| |
Sbjct 66 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 124
Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
| | | | | ||| |||||| | | |||||||||||||||||||||||||||||
Sbjct 125 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 184
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247
||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 185 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 244
Query 248 ATCAATCTGTC 258
|||||||||||
Sbjct 245 ATCAATCTGTC 255
>seq329
Length=1382
Score = 194 bits (214), Expect = 3e-47
Identities = 115/120 (96%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 139 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCA 198
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 17 GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCA 76
Query 199 CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||
Sbjct 77 CCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796796333475
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |