Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq389 242 6e-62 seq434 158 2e-36 seq420 158 2e-36 seq449 132 8e-29 >seq389 Length=623 Score = 242 bits (268), Expect = 6e-62 Identities = 139/142 (98%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 154 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTG 213 |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1 CGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTG 60 Query 214 TGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCA 273 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 61 TGGTAACTTTTCTGGCACCTCTAGCCTCAAATCTCGAGGGACTAAAGGATCGATAGGCCA 120 Query 274 CACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||| Sbjct 121 CACTTTCATGGTTTGTATTCAC 142 >seq434 Length=295 Score = 158 bits (174), Expect = 2e-36 Identities = 119/140 (85%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 154 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTG 213 |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 295 CGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTG 236 Query 214 TGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCA 273 |||||||||||||| |||||| || | ||| | | || | |||||||| ||||| Sbjct 235 TGGTAACTTTTCTGACACCTCCTGCTTAAAACCCCAAAGGTCAGAAGGATCGTGAGGCCC 176 Query 274 CACTTTCATGGTTTGTATTC 293 | |||||| ||| ||||||| Sbjct 175 CGCTTTCACGGTCTGTATTC 156 >seq420 Length=377 Score = 158 bits (174), Expect = 2e-36 Identities = 98/104 (94%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct 103 TACTAAGCTGAATTACCATTGCGATGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 45 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 104 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 44 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 1 >seq449 Length=251 Score = 132 bits (146), Expect = 8e-29 Identities = 93/105 (89%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | | || ||||||||||||||||||||||||||||| Sbjct 147 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 206 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 104 | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 207 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854395941600