Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq389 242 6e-62
seq434 158 2e-36
seq420 158 2e-36
seq449 132 8e-29
>seq389
Length=623
Score = 242 bits (268), Expect = 6e-62
Identities = 139/142 (98%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 154 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTG 213
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1 CGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTG 60
Query 214 TGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCA 273
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 61 TGGTAACTTTTCTGGCACCTCTAGCCTCAAATCTCGAGGGACTAAAGGATCGATAGGCCA 120
Query 274 CACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||
Sbjct 121 CACTTTCATGGTTTGTATTCAC 142
>seq434
Length=295
Score = 158 bits (174), Expect = 2e-36
Identities = 119/140 (85%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 154 CGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTG 213
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct 295 CGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTG 236
Query 214 TGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCA 273
|||||||||||||| |||||| || | ||| | | || | |||||||| |||||
Sbjct 235 TGGTAACTTTTCTGACACCTCCTGCTTAAAACCCCAAAGGTCAGAAGGATCGTGAGGCCC 176
Query 274 CACTTTCATGGTTTGTATTC 293
| |||||| ||| |||||||
Sbjct 175 CGCTTTCACGGTCTGTATTC 156
>seq420
Length=377
Score = 158 bits (174), Expect = 2e-36
Identities = 98/104 (94%), Gaps = 1/104 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| | || ||||||||||||||||||||||||||||||||
Sbjct 103 TACTAAGCTGAATTACCATTGCGATGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 45
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 104
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 44 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 1
>seq449
Length=251
Score = 132 bits (146), Expect = 8e-29
Identities = 93/105 (89%), Gaps = 1/105 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 147 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 206
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 104
| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 207 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA 251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854395941600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |