Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq329 168 8e-40 seq392 82.4 9e-14 >seq329 Length=1382 Score = 168 bits (186), Expect = 8e-40 Identities = 125/142 (88%), Gaps = 3/142 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCA-CGTCCTATTCTATTATTCCATGCTAATGTATTC 64 ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 523 CTAGAAACCAACAAAATAGAACCGCAACGTCCTATTCTATTATTCCATGCTAATGTATTC 582 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124 | || || |||||||||||||||||||||||| ||| ||||||||||||||||| | | Sbjct 583 GAGCATAGGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCCCCGAC 642 Query 125 ACA-CCAATGAA-GGCATACGG 144 ||| ||| |||| ||||| ||| Sbjct 643 ACACCCAGTGAAGGGCATGCGG 664 >seq392 Length=597 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 386 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 444 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 445 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595197261150