Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq378 479 5e-133
seq437 100 5e-19
>seq378
Length=711
Score = 479 bits (530), Expect = 5e-133
Identities = 292/309 (94%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||
Sbjct 30 GAACGAGACCTTAACCTGCTAAATAGCCCGGCCCGCCTAGGCGGGTCGCCGGCTTCTTAG 89
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 90 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 149
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||| ||||| | | |||||||||
Sbjct 150 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGT--ACCTCCTTGGCCG 207
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 208 GAAGGCCCGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 267
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 268 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 327
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 328 CCCTTTGTA 336
>seq437
Length=288
Score = 100 bits (110), Expect = 5e-19
Identities = 85/101 (84%), Gaps = 3/101 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 105 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 48
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171
|||||||||||||| | |||| |||||||||||||||||||
Sbjct 47 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGAC 7
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947195500800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |