Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq378 479 5e-133 seq437 100 5e-19 >seq378 Length=711 Score = 479 bits (530), Expect = 5e-133 Identities = 292/309 (94%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||| Sbjct 30 GAACGAGACCTTAACCTGCTAAATAGCCCGGCCCGCCTAGGCGGGTCGCCGGCTTCTTAG 89 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 90 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 149 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||| Sbjct 150 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAGCGAGT--ACCTCCTTGGCCG 207 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 208 GAAGGCCCGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 267 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 268 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 327 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 328 CCCTTTGTA 336 >seq437 Length=288 Score = 100 bits (110), Expect = 5e-19 Identities = 85/101 (84%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 105 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 48 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||| | |||| ||||||||||||||||||| Sbjct 47 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGAC 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947195500800