Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq389 636 5e-180
seq457 356 8e-96
seq298 244 3e-62
seq446 226 9e-57
seq434 116 1e-23
>seq389
Length=623
Score = 636 bits (704), Expect = 5e-180
Identities = 415/455 (91%), Gaps = 5/455 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 174 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 233
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||
Sbjct 234 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAGCCCGGGTC 293
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||| | |||| ||| || || |||| |||||| | ||
Sbjct 294 GGCCCGCGAAGGACCTTAATTCAAGAAGTTGGGCGT--AAACCCAGCCCCGCTTTACCGA 351
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| ||
Sbjct 352 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 408
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||||| | ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 409 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 468
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 469 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 528
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 588
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461
|||||||||||||||||||||||||||||||||||
Sbjct 589 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 623
>seq457
Length=235
Score = 356 bits (394), Expect = 8e-96
Identities = 214/225 (95%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 11 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 70
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 71 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 130
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 131 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 190
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 191 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 235
>seq298
Length=2671
Score = 244 bits (270), Expect = 3e-62
Identities = 140/143 (98%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 60
Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 61 GTTTACCCGCGCTTGGTTAAATTTCTTTACTTTGACATTCAGAGCACTGGGCAGAAATCA 120
Query 521 CATTGCGTCAACATCACTTTCTG 543
||||||||||||| |||||||||
Sbjct 121 CATTGCGTCAACACCACTTTCTG 143
>seq446
Length=259
Score = 226 bits (250), Expect = 9e-57
Identities = 130/133 (98%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 60
Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 120
Query 521 CATTGCGTCAACA 533
||| |||||||||
Sbjct 121 CATCGCGTCAACA 133
>seq434
Length=295
Score = 116 bits (128), Expect = 1e-23
Identities = 90/107 (84%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 122 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 63
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| ||| ||||||||| ||||||||||||||| || ||||
Sbjct 62 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 16
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635192232800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |