Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq389 636 5e-180 seq457 356 8e-96 seq298 244 3e-62 seq446 226 9e-57 seq434 116 1e-23 >seq389 Length=623 Score = 636 bits (704), Expect = 5e-180 Identities = 415/455 (91%), Gaps = 5/455 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 174 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 233 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| || Sbjct 234 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAGCCCGGGTC 293 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| | |||| ||| || || |||| |||||| | || Sbjct 294 GGCCCGCGAAGGACCTTAATTCAAGAAGTTGGGCGT--AAACCCAGCCCCGCTTTACCGA 351 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| || Sbjct 352 ATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 408 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 409 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 468 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 469 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 528 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 529 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 588 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461 ||||||||||||||||||||||||||||||||||| Sbjct 589 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 623 >seq457 Length=235 Score = 356 bits (394), Expect = 8e-96 Identities = 214/225 (95%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 11 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 70 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 71 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 130 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 131 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 190 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 191 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 235 >seq298 Length=2671 Score = 244 bits (270), Expect = 3e-62 Identities = 140/143 (98%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 60 Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 61 GTTTACCCGCGCTTGGTTAAATTTCTTTACTTTGACATTCAGAGCACTGGGCAGAAATCA 120 Query 521 CATTGCGTCAACATCACTTTCTG 543 ||||||||||||| ||||||||| Sbjct 121 CATTGCGTCAACACCACTTTCTG 143 >seq446 Length=259 Score = 226 bits (250), Expect = 9e-57 Identities = 130/133 (98%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 60 Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 120 Query 521 CATTGCGTCAACA 533 ||| ||||||||| Sbjct 121 CATCGCGTCAACA 133 >seq434 Length=295 Score = 116 bits (128), Expect = 1e-23 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 122 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 63 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| ||||||||||||||| || |||| Sbjct 62 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635192232800