Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq420 235 9e-60 seq449 104 4e-20 seq90 77.0 5e-12 seq190 75.2 2e-11 >seq420 Length=377 Score = 235 bits (260), Expect = 9e-60 Identities = 227/283 (80%), Gaps = 15/283 (5%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || || |||||| |||||||||||||||| |||| |||| |||||| Sbjct 101 GTACGAGAGGAACTGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 158 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 159 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 218 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| | |||| | |||| |||| | |||| |||||| ||||||||| ||||| || | Sbjct 219 GAACGCGATGATAC-CTCCCGCACGTTGTAGACGGATAAGAATAGGCTCCGGCCTCGCAT 277 Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236 | |||||||| | | || || || |||| | || | | | | ||| || Sbjct 278 CCTAGCAGGCGATTCCTCCACCGGACTC-----GAAGTGGACGGTGGT-AATTCGCGTAT 331 Query 237 TGCAATTTCACCATGCGCAGGGAT-AAATCCTTTGCAGACGAC 278 || ||||| | || | || ||||| |||||||||||||||||| Sbjct 332 TGTAATTTTAACACGAGC-GGGATCAAATCCTTTGCAGACGAC 373 >seq449 Length=251 Score = 104 bits (114), Expect = 4e-20 Identities = 93/114 (82%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| | || | || |||| || || | Sbjct 149 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 92 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 91 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 38 >seq90 Length=136398 Score = 77.0 bits (84), Expect = 5e-12 Identities = 64/77 (83%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 56 GCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 |||| ||||||| |||| ||||||||| | || ||||||||||| || | |||||||| Sbjct 43033 GCAGCGCCGCGACGCTATCATCTGCTGAACGATAGCTGAACGCCTTGAAAT-AGAATCCA 43091 Query 116 TGCCAGAACGGGGTGAT 132 |||||||||| | |||| Sbjct 43092 TGCCAGAACGTGATGAT 43108 >seq190 Length=36839 Score = 75.2 bits (82), Expect = 2e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 33 GGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTAT 88 |||||||||| |||| |||||||||||||||||| |||||||| |||||||| || Sbjct 31180 GGTTTTTGCGATTGTCCGACCAGGCAGTGCCGCGATGCTACCATGTGCTGGATAAT 31125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819196230400