Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq329 726 0.0
seq400 282 1e-73
seq436 179 1e-42
>seq329
Length=1382
Score = 726 bits (804), Expect = 0.0
Identities = 465/504 (92%), Gaps = 2/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 851 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 910
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 911 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 970
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| || | |||||| | ||||||||||||| |||| ||
Sbjct 971 TCTCAGGCTCCTTCTCCGGGGTCAAGCCCTAACCCTCCGTTACCCGTTGTAACCACGGCT 1030
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| | || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 GGCCAAGACCCAGCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 1090
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||
Sbjct 1091 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAGTGAGCCCCGAAGGGCATTGGT 1150
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||| ||||||||||||||||||
Sbjct 1151 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTAAGCATGTATTAGCTCTAG 1210
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 1211 AATTACCACGGTTATCCATGTAGT-AGGTACTATCAAATATACGATAACTGATTTAATGA 1269
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| | || ||| |||||| |||||||| ||||||||||||||||||
Sbjct 1270 GCCATTCGCAGTTTCGCCGTTTAG-GTGCTTAAACTTAGACTTGCATGGCTTAATCTTTG 1328
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 1329 AGACAAGCATATGACTACTGGCAG 1352
>seq400
Length=520
Score = 282 bits (312), Expect = 1e-73
Identities = 205/236 (87%), Gaps = 1/236 (0%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||
Sbjct 190 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 249
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 250 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 309
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
||||||||||||||||||||||||||||| ||||||||| |||||| | ||||||||||
Sbjct 310 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 369
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237
|| |||||||||||||||||||||||||| || ||||| | ||||||
Sbjct 370 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCG 425
>seq436
Length=289
Score = 179 bits (198), Expect = 1e-42
Identities = 140/166 (84%), Gaps = 6/166 (4%)
Strand=Plus/Plus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAA 398
|||||||||||||||||||||||||| |||||||| |||| | | | | | ||||
Sbjct 112 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGAGCGAGCGACCAAA 171
Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458
||| ||||||||||||||||||||||||||||||||||||| | | ||||||
Sbjct 172 GGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTA 231
Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 232 GACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510392825600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |