Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01- 05] 475 sequences; 35,730,243 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14 324 1e-83 seq88 138 9e-28 >seq14 Length=442650 Score = 324 bits (358), Expect = 1e-83 Identities = 597/869 (69%), Gaps = 6/869 (1%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || || |||| || || |||||||||||||| | ||| |||||||| ||||||| Sbjct 88049 GGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATG 88108 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || ||||||||||| || || ||| ||||| |||| |||| || || |||||||| Sbjct 88109 ATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGG 88168 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| ||||||||||| | |||| | || |||||||||| |||| ||| | |||| Sbjct 88169 TTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATG 88228 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATG 66240 |||| ||| || | ||||||| || | | | ||| | |||| | ||||| | Sbjct 88229 GCGTACCACAGCTTCTGAGCCTTCATGGT-CTTGCGGCCGCGGCCTTCTCTCTCGTACTT 88287 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 ||||| || ||||| ||||| | || | || | || |||| || || Sbjct 88288 CTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACTCGTTGGG 88347 Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 ||||| || | ||| || || | || || || || ||| || || ||||| ||||| Sbjct 88348 GCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCA 88407 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420 ||| || |||||| ||||| ||||| |||||| | ||||| || || |||||||| Sbjct 88408 GAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAGTC 88467 Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480 ||||||||| |||| || || |||||||| ||||||||||| ||||| | || ||| Sbjct 88468 GAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACG 88527 Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540 || ||||| ||||| ||||| || || |||||||||||||| | ||| || | Sbjct 88528 CTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAAT 88587 Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600 || ||||| || |||| ||||| ||| ||||| || || || || ||| ||| Sbjct 88588 GATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATACGGTG 88647 Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTC 66658 || |||||||||||||| |||||| |||| ||||| || ||| || | | | || Sbjct 88648 GACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGAGTATC 88707 Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718 | | || || ||||| |||| |||| ||| | |||| |||| || | || Sbjct 88708 --GTAGATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGA 88765 Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778 || | ||| || | || ||| || || || | |||||||| ||| | | | | ||| Sbjct 88766 GGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGCGAC 88825 Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838 || ||||||||||| || || ||||| | || || || || | ||| Sbjct 88826 ATCAGGTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAGATACCAACAGCAACA 88885 Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGAC 66867 ||||| | | || || ||||||||||| Sbjct 88886 CGCATGATCATGTGCTGTGGCCGTTCGAC 88914 >seq88 Length=140259 Score = 138 bits (152), Expect = 9e-28 Identities = 332/500 (66%), Gaps = 7/500 (1%) Strand=Plus/Minus Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGG--CTACATTTGGTGAACGA 61491 ||| || || |||||| | || |||||||| | || ||| |||| | | | | || Sbjct 57393 GAAGGCCGACTGGGCCCTGAAGTGGATCAC--GGACCACGAGTCTACCTACGCTCAGCGT 57336 Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551 || | || || || | || |||||| | || ||||| || | || ||| | ||||| Sbjct 57335 CTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCTTTCGCCTCCATCTTC 57276 Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611 ||| ||||||| || || | ||||| |||||||||||| ||| ||| |||| || || Sbjct 57275 TGGCTGAAGAAGCGCGGTTTGATGCCTGGTCTGACCTTCTCCAACGAGCTGATCTCTCGT 57216 Query 61612 GACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGT 61671 |||||||| |||| ||| || ||| |||| ||| | | ||| ||| || Sbjct 57215 GACGAGGGTCTGCACACTGACTTCGCTTGCCTGCTGTTCTCTC---ACCTGAGGAACCGC 57159 Query 61672 CCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTT 61731 || ||| |||||| | |||| | ||| || || || || |||| || Sbjct 57158 CCCAGCAAGGCGCGTGTCGAGAAGATCATCACTGATGCCGTCGTCATTGAGAAGGAGTTC 57099 Query 61732 CTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791 |||| || ||| | ||| | || |||||||||| || ||| |||||| Sbjct 57098 TTGACCGAGGCTCTTCCCTGCAGTCTGCTCGGCATGAACGCCAACCTGATGAAGCAGTAC 57039 Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851 || || || || ||||||||||| | |||| | || | || | |||| || | Sbjct 57038 ATCGAGTTCGTGGCCGACCGTCTCCTTGTCGCCCTTGGCAACGAGAAGGTCTACAAGTCT 56979 Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911 | ||||| || || |||||||| | || || || | |||||||| || || |||||| Sbjct 56978 ACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAG 56919 Query 61912 AAACGTGTAGGCGACTATCA 61931 || ||||| || ||||| || Sbjct 56918 AAGCGTGTCGGTGACTACCA 56899 Score = 122 bits (134), Expect = 7e-23 Identities = 211/298 (71%), Gaps = 9/298 (3%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| || |||||||||||||| | |||||| |||| | Sbjct 57806 ATCTGGCAGATGTACAAGAAGCATGAGGCTTCCTTCTGGACCGCCGAGGAGATCGACCTT 57747 Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTT-ATCGAGCGGTGAACAACATTTCAT-TA 61201 ||||| ||| || | |||||| | || | | ||| | ||| | | ||||| | Sbjct 57746 TCCAAGGACCTGCACGACTGGAGCAACCGCCTGAACGAT-GACGAAAAGTACTTCATCTC 57688 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 || ||| | ||||| || ||||| || ||||| ||||| ||||| | | || | Sbjct 57687 TACCATCCTTGCC-TTCTTCGCTGCTTCCGATGGTATTGTCAACGAGAACCTGGTCGAGC 57629 Query 61262 GTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 ||||| |||| | |||| || | | ||||| ||||| ||||||||||||||||| Sbjct 57628 GTTTCAGCGCCG-AGGTCCAGATCCCTGAGGCCCGTTGCTTCTACGGCTTCCAGATCATG 57570 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 |||||||| | ||||| |||| ||| | |||||||| || ||||||| ||||| Sbjct 57569 ATGGAGAACATTCACTCCGAGACATACTCCCTGCTCATCGACACATACATCAAGGAGC 57512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565698454000