Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Valsa_20mali_20var._20pyri_20[genbank_20GCA_5F000813385.1_202015-01-
05] 475 sequences; 35,730,243 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq14 324 1e-83
seq88 138 9e-28
>seq14
Length=442650
Score = 324 bits (358), Expect = 1e-83
Identities = 597/869 (69%), Gaps = 6/869 (1%)
Strand=Plus/Plus
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
|| || |||| || || |||||||||||||| | ||| |||||||| |||||||
Sbjct 88049 GGCAGAGCAATGGAGGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACAGTACTCGATG 88108
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
|| ||||||||||| || || ||| ||||| |||| |||| || || ||||||||
Sbjct 88109 ATCTCGGTGCACAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGG 88168
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
||||| ||||||||||| | |||| | || |||||||||| |||| ||| | ||||
Sbjct 88169 TTGCAGGCATCCTTGTAGAGCATGAAAGGGTTGCCGGTCTCGGTCTGGGCCTCGAGGATG 88228
Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATG 66240
|||| ||| || | ||||||| || | | | ||| | |||| | ||||| |
Sbjct 88229 GCGTACCACAGCTTCTGAGCCTTCATGGT-CTTGCGGCCGCGGCCTTCTCTCTCGTACTT 88287
Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300
||||| || ||||| ||||| | || | || | || |||| || ||
Sbjct 88288 CTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCAGCAAGGCCAGGGCACTCGTTGGG 88347
Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360
||||| || | ||| || || | || || || || ||| || || ||||| |||||
Sbjct 88348 GCACATGAGGGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAAGAGGTCAGGAATCCA 88407
Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420
||| || |||||| ||||| ||||| |||||| | ||||| || || ||||||||
Sbjct 88408 GAGAGCAAGGAAGAGGTCGCGGGCTCGGACCTCCTCCTTACCGTGGTTCTTTCGCAAGTC 88467
Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480
||||||||| |||| || || |||||||| ||||||||||| ||||| | || |||
Sbjct 88468 GAGGAACTCGAAGACATCAGCGTGCCATGGCTCCAGGTAGATAGCGAAAGCACCAGGACG 88527
Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540
|| ||||| ||||| ||||| || || |||||||||||||| | ||| || |
Sbjct 88528 CTTATTACCACCCTGGTCAACGTAACGGGCAGTGTTGTTGAAGACACGAAGCATGGGAAT 88587
Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600
|| ||||| || |||| ||||| ||| ||||| || || || || ||| |||
Sbjct 88588 GATACCGTTTGACGTGCCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATACGGTG 88647
Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTC 66658
|| |||||||||||||| |||||| |||| ||||| || ||| || | | | ||
Sbjct 88648 GACGTTCAGACCAATACCTCCGGCCATCTTGGAGATCATGGCGCAAGTCTTGAGAGTATC 88707
Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718
| | || || ||||| |||| |||| ||| | |||| |||| || | ||
Sbjct 88708 --GTAGATACCTTCAATACTGTCATCCTTCATGTCGACGAGGAAGCACGACGACAACTGA 88765
Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778
|| | ||| || | || ||| || || || | |||||||| ||| | | | | |||
Sbjct 88766 GGCTGGGGCGTACCAGCATTGAACAGTGTAGGCGATGCGTGCGTGAAGAATTTGTGCGAC 88825
Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838
|| ||||||||||| || || ||||| | || || || || | |||
Sbjct 88826 ATCAGGTTGTACGTCTCAATAACTCTCTCAATATCATCTCCCCAGATACCAACAGCAACA 88885
Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGAC 66867
||||| | | || || |||||||||||
Sbjct 88886 CGCATGATCATGTGCTGTGGCCGTTCGAC 88914
>seq88
Length=140259
Score = 138 bits (152), Expect = 9e-28
Identities = 332/500 (66%), Gaps = 7/500 (1%)
Strand=Plus/Minus
Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGG--CTACATTTGGTGAACGA 61491
||| || || |||||| | || |||||||| | || ||| |||| | | | | ||
Sbjct 57393 GAAGGCCGACTGGGCCCTGAAGTGGATCAC--GGACCACGAGTCTACCTACGCTCAGCGT 57336
Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551
|| | || || || | || |||||| | || ||||| || | || ||| | |||||
Sbjct 57335 CTGGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCTTTCGCCTCCATCTTC 57276
Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611
||| ||||||| || || | ||||| |||||||||||| ||| ||| |||| || ||
Sbjct 57275 TGGCTGAAGAAGCGCGGTTTGATGCCTGGTCTGACCTTCTCCAACGAGCTGATCTCTCGT 57216
Query 61612 GACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGT 61671
|||||||| |||| ||| || ||| |||| ||| | | ||| ||| ||
Sbjct 57215 GACGAGGGTCTGCACACTGACTTCGCTTGCCTGCTGTTCTCTC---ACCTGAGGAACCGC 57159
Query 61672 CCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTT 61731
|| ||| |||||| | |||| | ||| || || || || |||| ||
Sbjct 57158 CCCAGCAAGGCGCGTGTCGAGAAGATCATCACTGATGCCGTCGTCATTGAGAAGGAGTTC 57099
Query 61732 CTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTAT 61791
|||| || ||| | ||| | || |||||||||| || ||| ||||||
Sbjct 57098 TTGACCGAGGCTCTTCCCTGCAGTCTGCTCGGCATGAACGCCAACCTGATGAAGCAGTAC 57039
Query 61792 ATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACG 61851
|| || || || ||||||||||| | |||| | || | || | |||| || |
Sbjct 57038 ATCGAGTTCGTGGCCGACCGTCTCCTTGTCGCCCTTGGCAACGAGAAGGTCTACAAGTCT 56979
Query 61852 AAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAG 61911
| ||||| || || |||||||| | || || || | |||||||| || || ||||||
Sbjct 56978 ACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAG 56919
Query 61912 AAACGTGTAGGCGACTATCA 61931
|| ||||| || ||||| ||
Sbjct 56918 AAGCGTGTCGGTGACTACCA 56899
Score = 122 bits (134), Expect = 7e-23
Identities = 211/298 (71%), Gaps = 9/298 (3%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||| || |||||||||||||| | |||||| |||| |
Sbjct 57806 ATCTGGCAGATGTACAAGAAGCATGAGGCTTCCTTCTGGACCGCCGAGGAGATCGACCTT 57747
Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTT-ATCGAGCGGTGAACAACATTTCAT-TA 61201
||||| ||| || | |||||| | || | | ||| | ||| | | ||||| |
Sbjct 57746 TCCAAGGACCTGCACGACTGGAGCAACCGCCTGAACGAT-GACGAAAAGTACTTCATCTC 57688
Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261
|| ||| | ||||| || ||||| || ||||| ||||| ||||| | | || |
Sbjct 57687 TACCATCCTTGCC-TTCTTCGCTGCTTCCGATGGTATTGTCAACGAGAACCTGGTCGAGC 57629
Query 61262 GTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
||||| |||| | |||| || | | ||||| ||||| |||||||||||||||||
Sbjct 57628 GTTTCAGCGCCG-AGGTCCAGATCCCTGAGGCCCGTTGCTTCTACGGCTTCCAGATCATG 57570
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
|||||||| | ||||| |||| ||| | |||||||| || ||||||| |||||
Sbjct 57569 ATGGAGAACATTCACTCCGAGACATACTCCCTGCTCATCGACACATACATCAAGGAGC 57512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397565698454000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |